RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 NISCHQ9Y2I1 1504 aa39.44■■■■□ 3.9
CCDC78-212ENST00000482152 CCDC180Q9P1Z9 1646 aa35.02■■■■□ 3.2
CCDC78-212ENST00000482152 ABCC9O60706 1549 aa34.17■■■■□ 3.06
CCDC78-212ENST00000482152 NACADO15069 1562 aa32.98■■■□□ 2.87
CCDC78-212ENST00000482152 RB1CC1Q8TDY2 1594 aa32.98■■■□□ 2.87
CCDC78-212ENST00000482152 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
CCDC78-212ENST00000482152 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
CCDC78-212ENST00000482152 ZCCHC6Q5VYS8 1495 aaKnown RBP32.84■■■□□ 2.85
CCDC78-212ENST00000482152 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
CCDC78-212ENST00000482152 UNC13AQ9UPW8 1703 aa32.05■■■□□ 2.72
CCDC78-212ENST00000482152 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
CCDC78-212ENST00000482152 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
CCDC78-212ENST00000482152 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
CCDC78-212ENST00000482152 SHROOM4Q9ULL8 1493 aa31.73■■■□□ 2.67
CCDC78-212ENST00000482152 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
CCDC78-212ENST00000482152 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
CCDC78-212ENST00000482152 CC2D2AQ9P2K1 1620 aa30.92■■■□□ 2.54
CCDC78-212ENST00000482152 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
CCDC78-212ENST00000482152 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
CCDC78-212ENST00000482152 SMARCA4P51532 1647 aa30.54■■■□□ 2.48
CCDC78-212ENST00000482152 NCAPD3P42695 1498 aa30.45■■■□□ 2.47
CCDC78-212ENST00000482152 ATAD2BQ9ULI0 1458 aa30.42■■■□□ 2.46
CCDC78-212ENST00000482152 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
CCDC78-212ENST00000482152 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
CCDC78-212ENST00000482152 PEG3Q9GZU2 1588 aa30.3■■■□□ 2.44
CCDC78-212ENST00000482152 HMGXB3Q12766 1538 aa30.25■■■□□ 2.43
CCDC78-212ENST00000482152 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
CCDC78-212ENST00000482152 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
CCDC78-212ENST00000482152 WIZO95785 1651 aa29.97■■■□□ 2.39
CCDC78-212ENST00000482152 TOP2AP11388 1531 aaKnown RBP29.73■■■□□ 2.35
CCDC78-212ENST00000482152 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
CCDC78-212ENST00000482152 CADPSQ9ULU8 1353 aa29.57■■■□□ 2.32
CCDC78-212ENST00000482152 NESP48681 1621 aa29.56■■■□□ 2.32
CCDC78-212ENST00000482152 ERCC6Q03468 1493 aa29.51■■■□□ 2.31
CCDC78-212ENST00000482152 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
CCDC78-212ENST00000482152 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
CCDC78-212ENST00000482152 CFTRP13569 1480 aa29.37■■■□□ 2.29
CCDC78-212ENST00000482152 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
CCDC78-212ENST00000482152 CUX2O14529 1486 aa29.23■■■□□ 2.27
CCDC78-212ENST00000482152 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
CCDC78-212ENST00000482152 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
CCDC78-212ENST00000482152 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
CCDC78-212ENST00000482152 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
CCDC78-212ENST00000482152 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
CCDC78-212ENST00000482152 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
CCDC78-212ENST00000482152 WDR62O43379 1518 aa28.96■■■□□ 2.23
CCDC78-212ENST00000482152 URB2Q14146 1524 aaKnown RBP28.83■■■□□ 2.21
CCDC78-212ENST00000482152 ABCC8Q09428 1581 aa28.82■■■□□ 2.2
CCDC78-212ENST00000482152 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
CCDC78-212ENST00000482152 DNMBPQ6XZF7 1577 aa28.66■■■□□ 2.18
CCDC78-212ENST00000482152 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
CCDC78-212ENST00000482152 CUX1P39880 1505 aa28.46■■■□□ 2.15
CCDC78-212ENST00000482152 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
CCDC78-212ENST00000482152 SOGA1O94964 1423 aa28.4■■■□□ 2.14
CCDC78-212ENST00000482152 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
CCDC78-212ENST00000482152 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
CCDC78-212ENST00000482152 TARBP1Q13395 1621 aaKnown RBP28.34■■■□□ 2.13
CCDC78-212ENST00000482152 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
CCDC78-212ENST00000482152 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
CCDC78-212ENST00000482152 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
CCDC78-212ENST00000482152 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
CCDC78-212ENST00000482152 WDR97A6NE52 1622 aa28.23■■■□□ 2.11
CCDC78-212ENST00000482152 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
CCDC78-212ENST00000482152 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.11
CCDC78-212ENST00000482152 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
CCDC78-212ENST00000482152 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
CCDC78-212ENST00000482152 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
CCDC78-212ENST00000482152 ABCA10Q8WWZ4 1543 aa28.16■■■□□ 2.1
CCDC78-212ENST00000482152 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
CCDC78-212ENST00000482152 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
CCDC78-212ENST00000482152 GAPVD1Q14C86 1478 aa28.04■■■□□ 2.08
CCDC78-212ENST00000482152 MAGI1Q96QZ7 1491 aaPredicted RBP27.98■■■□□ 2.07
CCDC78-212ENST00000482152 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
CCDC78-212ENST00000482152 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
CCDC78-212ENST00000482152 FBLN2P98095 1184 aa27.91■■■□□ 2.06
CCDC78-212ENST00000482152 CHMP7Q8WUX9 453 aaPredicted RBP27.89■■■□□ 2.06
CCDC78-212ENST00000482152 PBRM1Q86U86 1689 aa27.86■■■□□ 2.05
CCDC78-212ENST00000482152 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
CCDC78-212ENST00000482152 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
CCDC78-212ENST00000482152 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
CCDC78-212ENST00000482152 CHD1O14646 1710 aa27.78■■■□□ 2.04
CCDC78-212ENST00000482152 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
CCDC78-212ENST00000482152 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
CCDC78-212ENST00000482152 IGF1RP08069 1367 aa27.69■■■□□ 2.02
CCDC78-212ENST00000482152 ADAMTS12P58397 1594 aa27.68■■■□□ 2.02
CCDC78-212ENST00000482152 GRIN2AQ12879 1464 aa27.65■■■□□ 2.02
CCDC78-212ENST00000482152 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
CCDC78-212ENST00000482152 NUP160Q12769 1436 aa27.55■■■□□ 2
CCDC78-212ENST00000482152 CUL7Q14999 1698 aa27.55■■■□□ 2
CCDC78-212ENST00000482152 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
CCDC78-212ENST00000482152 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
CCDC78-212ENST00000482152 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
CCDC78-212ENST00000482152 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
CCDC78-212ENST00000482152 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
CCDC78-212ENST00000482152 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
CCDC78-212ENST00000482152 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
CCDC78-212ENST00000482152 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
CCDC78-212ENST00000482152 EEA1Q15075 1411 aa27.35■■□□□ 1.97
CCDC78-212ENST00000482152 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
CCDC78-212ENST00000482152 JPH4Q96JJ6 628 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms