RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
SEMA4D-218ENST00000482128 CCDC180Q9P1Z9 1646 aa40.48■■■■■ 4.07
SEMA4D-218ENST00000482128 ABCC9O60706 1549 aa38.92■■■■□ 3.82
SEMA4D-218ENST00000482128 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
SEMA4D-218ENST00000482128 DCAF8L2P0C7V8 631 aa38.07■■■■□ 3.68
SEMA4D-218ENST00000482128 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
SEMA4D-218ENST00000482128 MYO15BQ96JP2 1530 aa37.93■■■■□ 3.66
SEMA4D-218ENST00000482128 NACADO15069 1562 aa37.91■■■■□ 3.66
SEMA4D-218ENST00000482128 RB1CC1Q8TDY2 1594 aa37.78■■■■□ 3.64
SEMA4D-218ENST00000482128 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
SEMA4D-218ENST00000482128 UNC13AQ9UPW8 1703 aa36.79■■■■□ 3.48
SEMA4D-218ENST00000482128 SHROOM4Q9ULL8 1493 aa36.68■■■■□ 3.46
SEMA4D-218ENST00000482128 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
SEMA4D-218ENST00000482128 PABPN1Q86U42 306 aaKnown RBP eCLIP36.48■■■■□ 3.43
SEMA4D-218ENST00000482128 CECR2Q9BXF3 1484 aa35.62■■■■□ 3.29
SEMA4D-218ENST00000482128 EIF4G1Q04637 1599 aaKnown RBP35.56■■■■□ 3.28
SEMA4D-218ENST00000482128 BAZ1AQ9NRL2 1556 aaPredicted RBP35.55■■■■□ 3.28
SEMA4D-218ENST00000482128 SMARCA4P51532 1647 aa35.44■■■■□ 3.26
SEMA4D-218ENST00000482128 MROH2BQ7Z745 1585 aa35.34■■■■□ 3.25
SEMA4D-218ENST00000482128 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
SEMA4D-218ENST00000482128 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
SEMA4D-218ENST00000482128 SMARCA2P51531 1590 aa35.11■■■■□ 3.21
SEMA4D-218ENST00000482128 PEG3Q9GZU2 1588 aa35.09■■■■□ 3.21
SEMA4D-218ENST00000482128 ATAD2BQ9ULI0 1458 aa35.08■■■■□ 3.21
SEMA4D-218ENST00000482128 DNAJC5BQ9UF47 199 aa34.99■■■■□ 3.19
SEMA4D-218ENST00000482128 WIZO95785 1651 aa34.98■■■■□ 3.19
SEMA4D-218ENST00000482128 NCAPD3P42695 1498 aa34.96■■■■□ 3.19
SEMA4D-218ENST00000482128 SUPT5HO00267 1087 aaKnown RBP34.89■■■■□ 3.18
SEMA4D-218ENST00000482128 HMGXB3Q12766 1538 aa34.87■■■■□ 3.17
SEMA4D-218ENST00000482128 BAZ1BQ9UIG0 1483 aaKnown RBP34.87■■■■□ 3.17
SEMA4D-218ENST00000482128 TOP2AP11388 1531 aaKnown RBP34.72■■■■□ 3.15
SEMA4D-218ENST00000482128 CCDC88BA6NC98 1476 aa34.28■■■■□ 3.08
SEMA4D-218ENST00000482128 CADPSQ9ULU8 1353 aa33.99■■■■□ 3.03
SEMA4D-218ENST00000482128 CFTRP13569 1480 aa33.94■■■■□ 3.02
SEMA4D-218ENST00000482128 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
SEMA4D-218ENST00000482128 NESP48681 1621 aa33.85■■■■□ 3.01
SEMA4D-218ENST00000482128 PDS5BQ9NTI5 1447 aa33.72■■■□□ 2.99
SEMA4D-218ENST00000482128 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
SEMA4D-218ENST00000482128 FANCD2Q9BXW9 1451 aa33.6■■■□□ 2.97
SEMA4D-218ENST00000482128 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
SEMA4D-218ENST00000482128 CEP164Q9UPV0 1460 aa33.51■■■□□ 2.96
SEMA4D-218ENST00000482128 KIF21AQ7Z4S6 1674 aa33.46■■■□□ 2.95
SEMA4D-218ENST00000482128 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
SEMA4D-218ENST00000482128 WRNQ14191 1432 aaPredicted RBP eCLIP33.23■■■□□ 2.91
SEMA4D-218ENST00000482128 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
SEMA4D-218ENST00000482128 THOC2Q8NI27 1593 aaKnown RBP33.2■■■□□ 2.91
SEMA4D-218ENST00000482128 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
SEMA4D-218ENST00000482128 DNMBPQ6XZF7 1577 aa33.17■■■□□ 2.9
SEMA4D-218ENST00000482128 WDR62O43379 1518 aa33.16■■■□□ 2.9
SEMA4D-218ENST00000482128 CUX1P39880 1505 aa33.12■■■□□ 2.89
SEMA4D-218ENST00000482128 TOPBP1Q92547 1522 aa33.12■■■□□ 2.89
SEMA4D-218ENST00000482128 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
SEMA4D-218ENST00000482128 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
SEMA4D-218ENST00000482128 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
SEMA4D-218ENST00000482128 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
SEMA4D-218ENST00000482128 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
SEMA4D-218ENST00000482128 CUX2O14529 1486 aa32.93■■■□□ 2.86
SEMA4D-218ENST00000482128 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
SEMA4D-218ENST00000482128 POLA1P09884 1462 aaPredicted RBP32.9■■■□□ 2.86
SEMA4D-218ENST00000482128 SOGA1O94964 1423 aa32.79■■■□□ 2.84
SEMA4D-218ENST00000482128 IFT140Q96RY7 1462 aa32.79■■■□□ 2.84
SEMA4D-218ENST00000482128 RAD54L2Q9Y4B4 1467 aa32.73■■■□□ 2.83
SEMA4D-218ENST00000482128 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
SEMA4D-218ENST00000482128 ABCA10Q8WWZ4 1543 aa32.66■■■□□ 2.82
SEMA4D-218ENST00000482128 WDR97A6NE52 1622 aa32.57■■■□□ 2.8
SEMA4D-218ENST00000482128 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.79
SEMA4D-218ENST00000482128 KIF27Q86VH2 1401 aa32.51■■■□□ 2.79
SEMA4D-218ENST00000482128 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
SEMA4D-218ENST00000482128 EIF4G3O43432 1585 aaKnown RBP32.44■■■□□ 2.78
SEMA4D-218ENST00000482128 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.78
SEMA4D-218ENST00000482128 GAPVD1Q14C86 1478 aa32.43■■■□□ 2.78
SEMA4D-218ENST00000482128 ABCA5Q8WWZ7 1642 aa32.43■■■□□ 2.78
SEMA4D-218ENST00000482128 EEA1Q15075 1411 aa32.39■■■□□ 2.78
SEMA4D-218ENST00000482128 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
SEMA4D-218ENST00000482128 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
SEMA4D-218ENST00000482128 ERICH3Q5RHP9 1530 aa32.29■■■□□ 2.76
SEMA4D-218ENST00000482128 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
SEMA4D-218ENST00000482128 IGF1RP08069 1367 aa32.22■■■□□ 2.75
SEMA4D-218ENST00000482128 FAM9AQ8IZU1 332 aaPredicted RBP32.22■■■□□ 2.75
SEMA4D-218ENST00000482128 MAGI1Q96QZ7 1491 aaPredicted RBP32.19■■■□□ 2.74
SEMA4D-218ENST00000482128 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
SEMA4D-218ENST00000482128 CSRNP3Q8WYN3 585 aa32.18■■■□□ 2.74
SEMA4D-218ENST00000482128 CUL7Q14999 1698 aa32.13■■■□□ 2.73
SEMA4D-218ENST00000482128 FHAD1B1AJZ9 1412 aa32.1■■■□□ 2.73
SEMA4D-218ENST00000482128 ADAMTS12P58397 1594 aa32.09■■■□□ 2.73
SEMA4D-218ENST00000482128 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
SEMA4D-218ENST00000482128 SYNJ2O15056 1496 aa32.04■■■□□ 2.72
SEMA4D-218ENST00000482128 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
SEMA4D-218ENST00000482128 CHMP7Q8WUX9 453 aaPredicted RBP31.99■■■□□ 2.71
SEMA4D-218ENST00000482128 RAPGEF2Q9Y4G8 1499 aa31.97■■■□□ 2.71
SEMA4D-218ENST00000482128 FBLN2P98095 1184 aa31.95■■■□□ 2.71
SEMA4D-218ENST00000482128 KIF21BO75037 1637 aa31.93■■■□□ 2.7
SEMA4D-218ENST00000482128 GRIN2AQ12879 1464 aa31.91■■■□□ 2.7
SEMA4D-218ENST00000482128 CHD1O14646 1710 aa31.84■■■□□ 2.69
SEMA4D-218ENST00000482128 GOLGA3Q08378 1498 aa31.84■■■□□ 2.69
SEMA4D-218ENST00000482128 NUP160Q12769 1436 aa31.74■■■□□ 2.67
SEMA4D-218ENST00000482128 EHMT2Q96KQ7 1210 aa31.73■■■□□ 2.67
SEMA4D-218ENST00000482128 UBTFP17480 764 aaKnown RBP31.69■■■□□ 2.66
SEMA4D-218ENST00000482128 OSCARQ8IYS5 282 aa31.69■■■□□ 2.66
SEMA4D-218ENST00000482128 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms