RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 NISCHQ9Y2I1 1504 aa49.2■■■■■ 5.47
VPS16-207ENST00000481812 CCDC180Q9P1Z9 1646 aa43.51■■■■■ 4.56
VPS16-207ENST00000481812 ABCC9O60706 1549 aa41.78■■■■■ 4.28
VPS16-207ENST00000481812 ZCCHC6Q5VYS8 1495 aaKnown RBP41.13■■■■■ 4.17
VPS16-207ENST00000481812 DCAF1Q9Y4B6 1507 aa40.83■■■■■ 4.13
VPS16-207ENST00000481812 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
VPS16-207ENST00000481812 NACADO15069 1562 aa40.74■■■■■ 4.11
VPS16-207ENST00000481812 DCAF8L2P0C7V8 631 aa40.69■■■■■ 4.1
VPS16-207ENST00000481812 RB1CC1Q8TDY2 1594 aa40.59■■■■■ 4.09
VPS16-207ENST00000481812 UNC13AQ9UPW8 1703 aa39.68■■■■□ 3.94
VPS16-207ENST00000481812 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
VPS16-207ENST00000481812 BICRAQ9NZM4 1560 aa39.32■■■■□ 3.88
VPS16-207ENST00000481812 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
VPS16-207ENST00000481812 SHROOM4Q9ULL8 1493 aa39.1■■■■□ 3.85
VPS16-207ENST00000481812 EIF4G1Q04637 1599 aaKnown RBP38.21■■■■□ 3.71
VPS16-207ENST00000481812 CECR2Q9BXF3 1484 aa38.19■■■■□ 3.7
VPS16-207ENST00000481812 BAZ1AQ9NRL2 1556 aaPredicted RBP38.1■■■■□ 3.69
VPS16-207ENST00000481812 SMARCA4P51532 1647 aa38.03■■■■□ 3.68
VPS16-207ENST00000481812 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
VPS16-207ENST00000481812 CC2D2AQ9P2K1 1620 aa37.88■■■■□ 3.65
VPS16-207ENST00000481812 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
VPS16-207ENST00000481812 PEG3Q9GZU2 1588 aa37.72■■■■□ 3.63
VPS16-207ENST00000481812 RSF1Q96T23 1441 aaPredicted RBP37.71■■■■□ 3.63
VPS16-207ENST00000481812 SMARCA2P51531 1590 aa37.68■■■■□ 3.62
VPS16-207ENST00000481812 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
VPS16-207ENST00000481812 NCAPD3P42695 1498 aa37.57■■■■□ 3.6
VPS16-207ENST00000481812 WIZO95785 1651 aa37.51■■■■□ 3.6
VPS16-207ENST00000481812 HMGXB3Q12766 1538 aa37.45■■■■□ 3.59
VPS16-207ENST00000481812 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
VPS16-207ENST00000481812 TOP2AP11388 1531 aaKnown RBP37.19■■■■□ 3.54
VPS16-207ENST00000481812 SUPT5HO00267 1087 aaKnown RBP37.16■■■■□ 3.54
VPS16-207ENST00000481812 CCDC88BA6NC98 1476 aa36.73■■■■□ 3.47
VPS16-207ENST00000481812 CADPSQ9ULU8 1353 aa36.48■■■■□ 3.43
VPS16-207ENST00000481812 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
VPS16-207ENST00000481812 CFTRP13569 1480 aa36.42■■■■□ 3.42
VPS16-207ENST00000481812 NESP48681 1621 aa36.35■■■■□ 3.41
VPS16-207ENST00000481812 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
VPS16-207ENST00000481812 PDS5BQ9NTI5 1447 aa36.18■■■■□ 3.38
VPS16-207ENST00000481812 FANCD2Q9BXW9 1451 aa36.03■■■■□ 3.36
VPS16-207ENST00000481812 KIF21AQ7Z4S6 1674 aa36■■■■□ 3.35
VPS16-207ENST00000481812 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
VPS16-207ENST00000481812 CEP164Q9UPV0 1460 aa35.93■■■■□ 3.34
VPS16-207ENST00000481812 MRC2Q9UBG0 1479 aa35.74■■■■□ 3.31
VPS16-207ENST00000481812 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
VPS16-207ENST00000481812 ABCC8Q09428 1581 aa35.65■■■■□ 3.3
VPS16-207ENST00000481812 WDR62O43379 1518 aa35.62■■■■□ 3.29
VPS16-207ENST00000481812 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
VPS16-207ENST00000481812 DNMBPQ6XZF7 1577 aa35.58■■■■□ 3.29
VPS16-207ENST00000481812 TOPBP1Q92547 1522 aa35.54■■■■□ 3.28
VPS16-207ENST00000481812 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.28
VPS16-207ENST00000481812 CUX1P39880 1505 aa35.51■■■■□ 3.27
VPS16-207ENST00000481812 CUX2O14529 1486 aa35.44■■■■□ 3.26
VPS16-207ENST00000481812 BIVM-ERCC5R4GMW8 1640 aa35.43■■■■□ 3.26
VPS16-207ENST00000481812 TOP2BQ02880 1626 aa35.43■■■■□ 3.26
VPS16-207ENST00000481812 SYNJ1O43426 1573 aa35.39■■■■□ 3.26
VPS16-207ENST00000481812 POLA1P09884 1462 aaPredicted RBP35.28■■■■□ 3.24
VPS16-207ENST00000481812 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
VPS16-207ENST00000481812 IFT140Q96RY7 1462 aa35.17■■■■□ 3.22
VPS16-207ENST00000481812 SOGA1O94964 1423 aa35.15■■■■□ 3.22
VPS16-207ENST00000481812 CHIC1Q5VXU3 224 aa35.15■■■■□ 3.22
VPS16-207ENST00000481812 TARBP1Q13395 1621 aaKnown RBP35.13■■■■□ 3.21
VPS16-207ENST00000481812 TRIM41Q8WV44 630 aa35.12■■■■□ 3.21
VPS16-207ENST00000481812 RAD54L2Q9Y4B4 1467 aa35.08■■■■□ 3.21
VPS16-207ENST00000481812 ABCA10Q8WWZ4 1543 aa35.02■■■■□ 3.2
VPS16-207ENST00000481812 WDR97A6NE52 1622 aa35.01■■■■□ 3.19
VPS16-207ENST00000481812 ZNF608Q9ULD9 1512 aaPredicted RBP34.89■■■■□ 3.18
VPS16-207ENST00000481812 TDRD9Q8NDG6 1382 aaKnown RBP34.82■■■■□ 3.16
VPS16-207ENST00000481812 EIF4G3O43432 1585 aaKnown RBP34.82■■■■□ 3.16
VPS16-207ENST00000481812 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
VPS16-207ENST00000481812 AQRO60306 1485 aaKnown RBP eCLIP34.78■■■■□ 3.16
VPS16-207ENST00000481812 KIF27Q86VH2 1401 aa34.76■■■■□ 3.16
VPS16-207ENST00000481812 GAPVD1Q14C86 1478 aa34.76■■■■□ 3.15
VPS16-207ENST00000481812 GRIN2BQ13224 1484 aa34.68■■■■□ 3.14
VPS16-207ENST00000481812 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
VPS16-207ENST00000481812 ERICH3Q5RHP9 1530 aa34.63■■■■□ 3.13
VPS16-207ENST00000481812 EEA1Q15075 1411 aa34.59■■■■□ 3.13
VPS16-207ENST00000481812 RUSC2Q8N2Y8 1516 aa34.58■■■■□ 3.13
VPS16-207ENST00000481812 MAGI1Q96QZ7 1491 aaPredicted RBP34.53■■■■□ 3.12
VPS16-207ENST00000481812 IGF1RP08069 1367 aa34.53■■■■□ 3.12
VPS16-207ENST00000481812 SNAPC4Q5SXM2 1469 aa34.48■■■■□ 3.11
VPS16-207ENST00000481812 CUL7Q14999 1698 aa34.44■■■■□ 3.1
VPS16-207ENST00000481812 ADAMTS12P58397 1594 aa34.4■■■■□ 3.1
VPS16-207ENST00000481812 FHAD1B1AJZ9 1412 aa34.4■■■■□ 3.1
VPS16-207ENST00000481812 CSRNP3Q8WYN3 585 aa34.39■■■■□ 3.1
VPS16-207ENST00000481812 SYNJ2O15056 1496 aa34.37■■■■□ 3.09
VPS16-207ENST00000481812 CARMIL1Q5VZK9 1371 aa34.34■■■■□ 3.09
VPS16-207ENST00000481812 FAM9AQ8IZU1 332 aaPredicted RBP34.28■■■■□ 3.08
VPS16-207ENST00000481812 PRXQ9BXM0 1461 aa34.27■■■■□ 3.08
VPS16-207ENST00000481812 CHD1O14646 1710 aa34.27■■■■□ 3.08
VPS16-207ENST00000481812 CHMP7Q8WUX9 453 aaPredicted RBP34.26■■■■□ 3.08
VPS16-207ENST00000481812 GRIN2AQ12879 1464 aa34.22■■■■□ 3.07
VPS16-207ENST00000481812 RAPGEF2Q9Y4G8 1499 aa34.21■■■■□ 3.07
VPS16-207ENST00000481812 FBLN2P98095 1184 aa34.19■■■■□ 3.06
VPS16-207ENST00000481812 KIF21BO75037 1637 aa34.15■■■■□ 3.06
VPS16-207ENST00000481812 NUP160Q12769 1436 aa34.06■■■■□ 3.04
VPS16-207ENST00000481812 OSCARQ8IYS5 282 aa34.06■■■■□ 3.04
VPS16-207ENST00000481812 CEP170Q5SW79 1584 aa34.01■■■■□ 3.03
VPS16-207ENST00000481812 GOLGA3Q08378 1498 aa33.97■■■■□ 3.03
VPS16-207ENST00000481812 CLASP1Q7Z460 1538 aa33.93■■■■□ 3.02
VPS16-207ENST00000481812 KIAA0586Q9BVV6 1533 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms