RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
MECP2-208ENST00000481807 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
MECP2-208ENST00000481807 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
MECP2-208ENST00000481807 ABCC9O60706 1549 aa16.75■□□□□ 0.27
MECP2-208ENST00000481807 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
MECP2-208ENST00000481807 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
MECP2-208ENST00000481807 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
MECP2-208ENST00000481807 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
MECP2-208ENST00000481807 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
MECP2-208ENST00000481807 NACADO15069 1562 aa15.59■□□□□ 0.09
MECP2-208ENST00000481807 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
MECP2-208ENST00000481807 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
MECP2-208ENST00000481807 UNC13AQ9UPW8 1703 aa15.39■□□□□ 0.05
MECP2-208ENST00000481807 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
MECP2-208ENST00000481807 MYO15BQ96JP2 1530 aa15.29■□□□□ 0.04
MECP2-208ENST00000481807 SHROOM4Q9ULL8 1493 aa15.24■□□□□ 0.03
MECP2-208ENST00000481807 FOXD1Q16676 465 aa15.22■□□□□ 0.03
MECP2-208ENST00000481807 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
MECP2-208ENST00000481807 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
MECP2-208ENST00000481807 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
MECP2-208ENST00000481807 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
MECP2-208ENST00000481807 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
MECP2-208ENST00000481807 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
MECP2-208ENST00000481807 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
MECP2-208ENST00000481807 CUX2O14529 1486 aa14.82□□□□□ -0.04
MECP2-208ENST00000481807 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
MECP2-208ENST00000481807 ERCC6Q03468 1493 aa14.52□□□□□ -0.08
MECP2-208ENST00000481807 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
MECP2-208ENST00000481807 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
MECP2-208ENST00000481807 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
MECP2-208ENST00000481807 THOC2Q8NI27 1593 aaKnown RBP14.29□□□□□ -0.12
MECP2-208ENST00000481807 MSH5O43196 834 aa14.28□□□□□ -0.12
MECP2-208ENST00000481807 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
MECP2-208ENST00000481807 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
MECP2-208ENST00000481807 NESP48681 1621 aa14.24□□□□□ -0.13
MECP2-208ENST00000481807 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
MECP2-208ENST00000481807 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
MECP2-208ENST00000481807 ADRA2BP18089 450 aa14.19□□□□□ -0.14
MECP2-208ENST00000481807 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
MECP2-208ENST00000481807 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
MECP2-208ENST00000481807 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
MECP2-208ENST00000481807 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
MECP2-208ENST00000481807 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
MECP2-208ENST00000481807 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
MECP2-208ENST00000481807 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
MECP2-208ENST00000481807 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
MECP2-208ENST00000481807 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
MECP2-208ENST00000481807 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
MECP2-208ENST00000481807 WDR62O43379 1518 aa13.99□□□□□ -0.17
MECP2-208ENST00000481807 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
MECP2-208ENST00000481807 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
MECP2-208ENST00000481807 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
MECP2-208ENST00000481807 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
MECP2-208ENST00000481807 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.2
MECP2-208ENST00000481807 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.2
MECP2-208ENST00000481807 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.2
MECP2-208ENST00000481807 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
MECP2-208ENST00000481807 WIZO95785 1651 aa13.76□□□□□ -0.21
MECP2-208ENST00000481807 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
MECP2-208ENST00000481807 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
MECP2-208ENST00000481807 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
MECP2-208ENST00000481807 CFTRP13569 1480 aa13.65□□□□□ -0.22
MECP2-208ENST00000481807 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
MECP2-208ENST00000481807 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
MECP2-208ENST00000481807 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
MECP2-208ENST00000481807 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
MECP2-208ENST00000481807 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
MECP2-208ENST00000481807 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
MECP2-208ENST00000481807 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
MECP2-208ENST00000481807 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
MECP2-208ENST00000481807 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
MECP2-208ENST00000481807 CHD1O14646 1710 aa13.42□□□□□ -0.26
MECP2-208ENST00000481807 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
MECP2-208ENST00000481807 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
MECP2-208ENST00000481807 TARBP1Q13395 1621 aaKnown RBP13.34□□□□□ -0.27
MECP2-208ENST00000481807 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
MECP2-208ENST00000481807 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
MECP2-208ENST00000481807 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
MECP2-208ENST00000481807 FBLN2P98095 1184 aa13.26□□□□□ -0.29
MECP2-208ENST00000481807 WDR97A6NE52 1622 aa13.25□□□□□ -0.29
MECP2-208ENST00000481807 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
MECP2-208ENST00000481807 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
MECP2-208ENST00000481807 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.3
MECP2-208ENST00000481807 GAPVD1Q14C86 1478 aa13.2□□□□□ -0.3
MECP2-208ENST00000481807 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
MECP2-208ENST00000481807 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
MECP2-208ENST00000481807 WRNQ14191 1432 aaPredicted RBP eCLIP13.16□□□□□ -0.3
MECP2-208ENST00000481807 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
MECP2-208ENST00000481807 SYNJ2O15056 1496 aa13.15□□□□□ -0.3
MECP2-208ENST00000481807 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
MECP2-208ENST00000481807 SOGA1O94964 1423 aa13.13□□□□□ -0.31
MECP2-208ENST00000481807 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
MECP2-208ENST00000481807 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
MECP2-208ENST00000481807 TOP2BQ02880 1626 aa13.08□□□□□ -0.32
MECP2-208ENST00000481807 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
MECP2-208ENST00000481807 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
MECP2-208ENST00000481807 EEA1Q15075 1411 aa13.05□□□□□ -0.32
MECP2-208ENST00000481807 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
MECP2-208ENST00000481807 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
MECP2-208ENST00000481807 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms