RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 NISCHQ9Y2I1 1504 aa54.27■■■■■ 6.28
SHISA4-203ENST00000481699 CCDC180Q9P1Z9 1646 aa47.88■■■■■ 5.25
SHISA4-203ENST00000481699 ABCC9O60706 1549 aa46.18■■■■■ 4.98
SHISA4-203ENST00000481699 ZCCHC6Q5VYS8 1495 aaKnown RBP45.36■■■■■ 4.85
SHISA4-203ENST00000481699 DCAF8L2P0C7V8 631 aa45.25■■■■■ 4.83
SHISA4-203ENST00000481699 DCAF1Q9Y4B6 1507 aa44.91■■■■■ 4.78
SHISA4-203ENST00000481699 NACADO15069 1562 aa44.86■■■■■ 4.77
SHISA4-203ENST00000481699 MYO15BQ96JP2 1530 aa44.8■■■■■ 4.76
SHISA4-203ENST00000481699 RB1CC1Q8TDY2 1594 aa44.76■■■■■ 4.76
SHISA4-203ENST00000481699 DNAJC5BQ9UF47 199 aa43.87■■■■■ 4.61
SHISA4-203ENST00000481699 SCRIBQ14160 1630 aa43.83■■■■■ 4.61
SHISA4-203ENST00000481699 UNC13AQ9UPW8 1703 aa43.59■■■■■ 4.57
SHISA4-203ENST00000481699 SHROOM4Q9ULL8 1493 aa43.5■■■■■ 4.55
SHISA4-203ENST00000481699 PABPN1Q86U42 306 aaKnown RBP eCLIP43.33■■■■■ 4.53
SHISA4-203ENST00000481699 BICRAQ9NZM4 1560 aa43.25■■■■■ 4.51
SHISA4-203ENST00000481699 CECR2Q9BXF3 1484 aa42.17■■■■■ 4.34
SHISA4-203ENST00000481699 EIF4G1Q04637 1599 aaKnown RBP42.12■■■■■ 4.33
SHISA4-203ENST00000481699 BAZ1AQ9NRL2 1556 aaPredicted RBP42.05■■■■■ 4.32
SHISA4-203ENST00000481699 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
SHISA4-203ENST00000481699 MROH2BQ7Z745 1585 aa41.84■■■■■ 4.29
SHISA4-203ENST00000481699 CC2D2AQ9P2K1 1620 aa41.75■■■■■ 4.27
SHISA4-203ENST00000481699 RSF1Q96T23 1441 aaPredicted RBP41.66■■■■■ 4.26
SHISA4-203ENST00000481699 SMARCA2P51531 1590 aa41.55■■■■■ 4.24
SHISA4-203ENST00000481699 ATAD2BQ9ULI0 1458 aa41.53■■■■■ 4.24
SHISA4-203ENST00000481699 PEG3Q9GZU2 1588 aa41.46■■■■■ 4.23
SHISA4-203ENST00000481699 WIZO95785 1651 aa41.42■■■■■ 4.22
SHISA4-203ENST00000481699 NCAPD3P42695 1498 aa41.37■■■■■ 4.21
SHISA4-203ENST00000481699 SUPT5HO00267 1087 aaKnown RBP41.37■■■■■ 4.21
SHISA4-203ENST00000481699 BAZ1BQ9UIG0 1483 aaKnown RBP41.3■■■■■ 4.2
SHISA4-203ENST00000481699 HMGXB3Q12766 1538 aa41.24■■■■■ 4.19
SHISA4-203ENST00000481699 TOP2AP11388 1531 aaKnown RBP41.07■■■■■ 4.16
SHISA4-203ENST00000481699 DNAJC5Q9H3Z4 198 aa40.66■■■■■ 4.1
SHISA4-203ENST00000481699 CCDC88BA6NC98 1476 aa40.58■■■■■ 4.09
SHISA4-203ENST00000481699 CADPSQ9ULU8 1353 aa40.26■■■■■ 4.04
SHISA4-203ENST00000481699 LAMC3Q9Y6N6 1575 aa40.18■■■■■ 4.02
SHISA4-203ENST00000481699 NESP48681 1621 aa40.15■■■■■ 4.02
SHISA4-203ENST00000481699 CFTRP13569 1480 aa40.14■■■■■ 4.02
SHISA4-203ENST00000481699 PDS5BQ9NTI5 1447 aa39.95■■■■□ 3.99
SHISA4-203ENST00000481699 CUX2O14529 1486 aa39.89■■■■□ 3.98
SHISA4-203ENST00000481699 PRDM2Q13029 1718 aa39.85■■■■□ 3.97
SHISA4-203ENST00000481699 ERCC6Q03468 1493 aa39.83■■■■□ 3.97
SHISA4-203ENST00000481699 FANCD2Q9BXW9 1451 aa39.81■■■■□ 3.96
SHISA4-203ENST00000481699 CEP164Q9UPV0 1460 aa39.7■■■■□ 3.95
SHISA4-203ENST00000481699 KIF21AQ7Z4S6 1674 aa39.67■■■■□ 3.94
SHISA4-203ENST00000481699 MRC2Q9UBG0 1479 aa39.46■■■■□ 3.91
SHISA4-203ENST00000481699 ABCC8Q09428 1581 aa39.33■■■■□ 3.89
SHISA4-203ENST00000481699 THOC2Q8NI27 1593 aaKnown RBP39.33■■■■□ 3.89
SHISA4-203ENST00000481699 WRNQ14191 1432 aaPredicted RBP eCLIP39.31■■■■□ 3.88
SHISA4-203ENST00000481699 URB2Q14146 1524 aaKnown RBP39.3■■■■□ 3.88
SHISA4-203ENST00000481699 DNMBPQ6XZF7 1577 aa39.25■■■■□ 3.87
SHISA4-203ENST00000481699 WDR62O43379 1518 aa39.24■■■■□ 3.87
SHISA4-203ENST00000481699 TOPBP1Q92547 1522 aa39.23■■■■□ 3.87
SHISA4-203ENST00000481699 CUX1P39880 1505 aa39.2■■■■□ 3.87
SHISA4-203ENST00000481699 SYNJ1O43426 1573 aa39.11■■■■□ 3.85
SHISA4-203ENST00000481699 TOP2BQ02880 1626 aa39.08■■■■□ 3.85
SHISA4-203ENST00000481699 BIVM-ERCC5R4GMW8 1640 aa39.05■■■■□ 3.84
SHISA4-203ENST00000481699 TRIM41Q8WV44 630 aa39.04■■■■□ 3.84
SHISA4-203ENST00000481699 FGD5Q6ZNL6 1462 aa38.99■■■■□ 3.83
SHISA4-203ENST00000481699 CHIC1Q5VXU3 224 aa38.98■■■■□ 3.83
SHISA4-203ENST00000481699 POLA1P09884 1462 aaPredicted RBP38.94■■■■□ 3.82
SHISA4-203ENST00000481699 SOGA1O94964 1423 aa38.86■■■■□ 3.81
SHISA4-203ENST00000481699 IFT140Q96RY7 1462 aa38.83■■■■□ 3.81
SHISA4-203ENST00000481699 RAD54L2Q9Y4B4 1467 aa38.79■■■■□ 3.8
SHISA4-203ENST00000481699 TARBP1Q13395 1621 aaKnown RBP38.68■■■■□ 3.78
SHISA4-203ENST00000481699 ABCA10Q8WWZ4 1543 aa38.63■■■■□ 3.77
SHISA4-203ENST00000481699 TDRD9Q8NDG6 1382 aaKnown RBP38.54■■■■□ 3.76
SHISA4-203ENST00000481699 WDR97A6NE52 1622 aa38.53■■■■□ 3.76
SHISA4-203ENST00000481699 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
SHISA4-203ENST00000481699 KIF27Q86VH2 1401 aa38.46■■■■□ 3.75
SHISA4-203ENST00000481699 AQRO60306 1485 aaKnown RBP eCLIP38.45■■■■□ 3.75
SHISA4-203ENST00000481699 EIF4G3O43432 1585 aaKnown RBP38.42■■■■□ 3.74
SHISA4-203ENST00000481699 GAPVD1Q14C86 1478 aa38.41■■■■□ 3.74
SHISA4-203ENST00000481699 ABCA5Q8WWZ7 1642 aa38.37■■■■□ 3.73
SHISA4-203ENST00000481699 GRIN2BQ13224 1484 aa38.3■■■■□ 3.72
SHISA4-203ENST00000481699 EEA1Q15075 1411 aa38.26■■■■□ 3.72
SHISA4-203ENST00000481699 RUSC2Q8N2Y8 1516 aa38.26■■■■□ 3.72
SHISA4-203ENST00000481699 FAM9AQ8IZU1 332 aaPredicted RBP38.23■■■■□ 3.71
SHISA4-203ENST00000481699 PBRM1Q86U86 1689 aa38.22■■■■□ 3.71
SHISA4-203ENST00000481699 ERICH3Q5RHP9 1530 aa38.19■■■■□ 3.7
SHISA4-203ENST00000481699 IGF1RP08069 1367 aa38.14■■■■□ 3.7
SHISA4-203ENST00000481699 SNAPC4Q5SXM2 1469 aa38.14■■■■□ 3.7
SHISA4-203ENST00000481699 MAGI1Q96QZ7 1491 aaPredicted RBP38.1■■■■□ 3.69
SHISA4-203ENST00000481699 CSRNP3Q8WYN3 585 aa38.1■■■■□ 3.69
SHISA4-203ENST00000481699 CUL7Q14999 1698 aa38.01■■■■□ 3.68
SHISA4-203ENST00000481699 FHAD1B1AJZ9 1412 aa38■■■■□ 3.67
SHISA4-203ENST00000481699 CARMIL1Q5VZK9 1371 aa37.99■■■■□ 3.67
SHISA4-203ENST00000481699 ADAMTS12P58397 1594 aa37.98■■■■□ 3.67
SHISA4-203ENST00000481699 FBLN2P98095 1184 aa37.98■■■■□ 3.67
SHISA4-203ENST00000481699 OSCARQ8IYS5 282 aa37.97■■■■□ 3.67
SHISA4-203ENST00000481699 CHMP7Q8WUX9 453 aaPredicted RBP37.97■■■■□ 3.67
SHISA4-203ENST00000481699 SYNJ2O15056 1496 aa37.94■■■■□ 3.66
SHISA4-203ENST00000481699 RAPGEF2Q9Y4G8 1499 aa37.84■■■■□ 3.65
SHISA4-203ENST00000481699 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
SHISA4-203ENST00000481699 GRIN2AQ12879 1464 aa37.78■■■■□ 3.64
SHISA4-203ENST00000481699 CHD1O14646 1710 aa37.76■■■■□ 3.64
SHISA4-203ENST00000481699 KIF21BO75037 1637 aa37.73■■■■□ 3.63
SHISA4-203ENST00000481699 EHMT2Q96KQ7 1210 aa37.7■■■■□ 3.63
SHISA4-203ENST00000481699 RIMBP3CA6NJZ7 1639 aa37.65■■■■□ 3.62
SHISA4-203ENST00000481699 RIMBP3BA6NNM3 1639 aa37.65■■■■□ 3.62
SHISA4-203ENST00000481699 RIMBP3Q9UFD9 1639 aa37.65■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms