RNA–Protein interactions for RNA: ENST00000481563.6

PAX6-217, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-217ENST00000481563 NISCHQ9Y2I1 1504 aa30.18■■■□□ 2.42
PAX6-217ENST00000481563 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
PAX6-217ENST00000481563 ABCC9O60706 1549 aa25.69■■□□□ 1.7
PAX6-217ENST00000481563 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
PAX6-217ENST00000481563 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
PAX6-217ENST00000481563 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
PAX6-217ENST00000481563 NACADO15069 1562 aa24.9■■□□□ 1.58
PAX6-217ENST00000481563 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
PAX6-217ENST00000481563 MYO15BQ96JP2 1530 aa24.85■■□□□ 1.57
PAX6-217ENST00000481563 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
PAX6-217ENST00000481563 UNC13AQ9UPW8 1703 aa24.37■■□□□ 1.49
PAX6-217ENST00000481563 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
PAX6-217ENST00000481563 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
PAX6-217ENST00000481563 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PAX6-217ENST00000481563 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
PAX6-217ENST00000481563 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
PAX6-217ENST00000481563 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
PAX6-217ENST00000481563 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
PAX6-217ENST00000481563 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
PAX6-217ENST00000481563 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
PAX6-217ENST00000481563 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
PAX6-217ENST00000481563 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
PAX6-217ENST00000481563 WIZO95785 1651 aa23.11■■□□□ 1.29
PAX6-217ENST00000481563 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.28
PAX6-217ENST00000481563 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
PAX6-217ENST00000481563 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
PAX6-217ENST00000481563 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
PAX6-217ENST00000481563 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
PAX6-217ENST00000481563 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
PAX6-217ENST00000481563 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
PAX6-217ENST00000481563 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
PAX6-217ENST00000481563 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
PAX6-217ENST00000481563 NESP48681 1621 aa22.36■■□□□ 1.17
PAX6-217ENST00000481563 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
PAX6-217ENST00000481563 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
PAX6-217ENST00000481563 CFTRP13569 1480 aa22.29■■□□□ 1.16
PAX6-217ENST00000481563 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
PAX6-217ENST00000481563 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
PAX6-217ENST00000481563 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
PAX6-217ENST00000481563 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
PAX6-217ENST00000481563 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
PAX6-217ENST00000481563 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
PAX6-217ENST00000481563 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
PAX6-217ENST00000481563 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
PAX6-217ENST00000481563 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
PAX6-217ENST00000481563 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
PAX6-217ENST00000481563 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
PAX6-217ENST00000481563 CUX1P39880 1505 aa21.83■■□□□ 1.08
PAX6-217ENST00000481563 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
PAX6-217ENST00000481563 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
PAX6-217ENST00000481563 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
PAX6-217ENST00000481563 WDR62O43379 1518 aa21.81■■□□□ 1.08
PAX6-217ENST00000481563 TOP2BQ02880 1626 aa21.75■■□□□ 1.07
PAX6-217ENST00000481563 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
PAX6-217ENST00000481563 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
PAX6-217ENST00000481563 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
PAX6-217ENST00000481563 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
PAX6-217ENST00000481563 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
PAX6-217ENST00000481563 CUX2O14529 1486 aa21.62■■□□□ 1.05
PAX6-217ENST00000481563 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
PAX6-217ENST00000481563 SOGA1O94964 1423 aa21.57■■□□□ 1.04
PAX6-217ENST00000481563 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
PAX6-217ENST00000481563 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
PAX6-217ENST00000481563 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
PAX6-217ENST00000481563 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
PAX6-217ENST00000481563 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
PAX6-217ENST00000481563 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
PAX6-217ENST00000481563 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
PAX6-217ENST00000481563 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
PAX6-217ENST00000481563 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
PAX6-217ENST00000481563 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
PAX6-217ENST00000481563 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
PAX6-217ENST00000481563 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
PAX6-217ENST00000481563 PBRM1Q86U86 1689 aa21.31■■□□□ 1
PAX6-217ENST00000481563 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
PAX6-217ENST00000481563 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
PAX6-217ENST00000481563 EEA1Q15075 1411 aa21.22■□□□□ 0.99
PAX6-217ENST00000481563 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
PAX6-217ENST00000481563 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
PAX6-217ENST00000481563 IGF1RP08069 1367 aa21.18■□□□□ 0.98
PAX6-217ENST00000481563 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
PAX6-217ENST00000481563 CUL7Q14999 1698 aa21.14■□□□□ 0.98
PAX6-217ENST00000481563 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
PAX6-217ENST00000481563 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.97
PAX6-217ENST00000481563 CARMIL1Q5VZK9 1371 aa21.09■□□□□ 0.97
PAX6-217ENST00000481563 FBLN2P98095 1184 aa21.08■□□□□ 0.97
PAX6-217ENST00000481563 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.96
PAX6-217ENST00000481563 CHD1O14646 1710 aa21.07■□□□□ 0.96
PAX6-217ENST00000481563 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
PAX6-217ENST00000481563 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
PAX6-217ENST00000481563 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
PAX6-217ENST00000481563 PRXQ9BXM0 1461 aa21.03■□□□□ 0.96
PAX6-217ENST00000481563 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
PAX6-217ENST00000481563 KIF21BO75037 1637 aa21■□□□□ 0.95
PAX6-217ENST00000481563 GRIN2AQ12879 1464 aa21■□□□□ 0.95
PAX6-217ENST00000481563 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
PAX6-217ENST00000481563 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
PAX6-217ENST00000481563 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
PAX6-217ENST00000481563 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
PAX6-217ENST00000481563 NUP160Q12769 1436 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms