RNA–Protein interactions for RNA: ENST00000481095.5

CNIH3-207, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-207ENST00000481095 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
CNIH3-207ENST00000481095 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
CNIH3-207ENST00000481095 ABCC9O60706 1549 aa18.72■□□□□ 0.59
CNIH3-207ENST00000481095 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
CNIH3-207ENST00000481095 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
CNIH3-207ENST00000481095 NACADO15069 1562 aa17.83■□□□□ 0.44
CNIH3-207ENST00000481095 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
CNIH3-207ENST00000481095 MYO15BQ96JP2 1530 aa17.71■□□□□ 0.43
CNIH3-207ENST00000481095 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
CNIH3-207ENST00000481095 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
CNIH3-207ENST00000481095 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
CNIH3-207ENST00000481095 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
CNIH3-207ENST00000481095 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
CNIH3-207ENST00000481095 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
CNIH3-207ENST00000481095 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.32
CNIH3-207ENST00000481095 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
CNIH3-207ENST00000481095 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
CNIH3-207ENST00000481095 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
CNIH3-207ENST00000481095 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
CNIH3-207ENST00000481095 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
CNIH3-207ENST00000481095 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
CNIH3-207ENST00000481095 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
CNIH3-207ENST00000481095 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
CNIH3-207ENST00000481095 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
CNIH3-207ENST00000481095 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
CNIH3-207ENST00000481095 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
CNIH3-207ENST00000481095 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
CNIH3-207ENST00000481095 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
CNIH3-207ENST00000481095 WIZO95785 1651 aa16.27■□□□□ 0.2
CNIH3-207ENST00000481095 NESP48681 1621 aa16.21■□□□□ 0.19
CNIH3-207ENST00000481095 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
CNIH3-207ENST00000481095 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
CNIH3-207ENST00000481095 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
CNIH3-207ENST00000481095 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
CNIH3-207ENST00000481095 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
CNIH3-207ENST00000481095 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
CNIH3-207ENST00000481095 CFTRP13569 1480 aa15.94■□□□□ 0.14
CNIH3-207ENST00000481095 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
CNIH3-207ENST00000481095 CUX2O14529 1486 aa15.9■□□□□ 0.14
CNIH3-207ENST00000481095 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
CNIH3-207ENST00000481095 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
CNIH3-207ENST00000481095 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
CNIH3-207ENST00000481095 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
CNIH3-207ENST00000481095 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
CNIH3-207ENST00000481095 WDR62O43379 1518 aa15.73■□□□□ 0.11
CNIH3-207ENST00000481095 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
CNIH3-207ENST00000481095 DNAJC5Q9H3Z4 198 aa15.64■□□□□ 0.09
CNIH3-207ENST00000481095 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
CNIH3-207ENST00000481095 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
CNIH3-207ENST00000481095 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
CNIH3-207ENST00000481095 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
CNIH3-207ENST00000481095 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
CNIH3-207ENST00000481095 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
CNIH3-207ENST00000481095 CUX1P39880 1505 aa15.47■□□□□ 0.07
CNIH3-207ENST00000481095 POLA1P09884 1462 aaPredicted RBP15.46■□□□□ 0.07
CNIH3-207ENST00000481095 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.06
CNIH3-207ENST00000481095 SOGA1O94964 1423 aa15.43■□□□□ 0.06
CNIH3-207ENST00000481095 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
CNIH3-207ENST00000481095 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
CNIH3-207ENST00000481095 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
CNIH3-207ENST00000481095 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
CNIH3-207ENST00000481095 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
CNIH3-207ENST00000481095 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
CNIH3-207ENST00000481095 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
CNIH3-207ENST00000481095 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
CNIH3-207ENST00000481095 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
CNIH3-207ENST00000481095 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
CNIH3-207ENST00000481095 FBLN2P98095 1184 aa15.25■□□□□ 0.03
CNIH3-207ENST00000481095 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
CNIH3-207ENST00000481095 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
CNIH3-207ENST00000481095 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
CNIH3-207ENST00000481095 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
CNIH3-207ENST00000481095 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
CNIH3-207ENST00000481095 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
CNIH3-207ENST00000481095 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
CNIH3-207ENST00000481095 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
CNIH3-207ENST00000481095 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
CNIH3-207ENST00000481095 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
CNIH3-207ENST00000481095 CHD1O14646 1710 aa15.1■□□□□ 0.01
CNIH3-207ENST00000481095 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
CNIH3-207ENST00000481095 PBRM1Q86U86 1689 aa15.06■□□□□ 0
CNIH3-207ENST00000481095 IGF1RP08069 1367 aa15.05■□□□□ -0
CNIH3-207ENST00000481095 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
CNIH3-207ENST00000481095 ARHGEF11O15085 1522 aa15.02■□□□□ -0
CNIH3-207ENST00000481095 ERICH3Q5RHP9 1530 aa15.02■□□□□ -0
CNIH3-207ENST00000481095 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
CNIH3-207ENST00000481095 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
CNIH3-207ENST00000481095 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
CNIH3-207ENST00000481095 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
CNIH3-207ENST00000481095 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
CNIH3-207ENST00000481095 KIF27Q86VH2 1401 aa15□□□□□ -0.01
CNIH3-207ENST00000481095 ADAMTS12P58397 1594 aa15□□□□□ -0.01
CNIH3-207ENST00000481095 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
CNIH3-207ENST00000481095 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
CNIH3-207ENST00000481095 NUP160Q12769 1436 aa14.97□□□□□ -0.01
CNIH3-207ENST00000481095 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
CNIH3-207ENST00000481095 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
CNIH3-207ENST00000481095 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
CNIH3-207ENST00000481095 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
CNIH3-207ENST00000481095 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms