RNA–Protein interactions for RNA: ENST00000481028.1

SGSM3-211, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-211ENST00000481028 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
SGSM3-211ENST00000481028 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
SGSM3-211ENST00000481028 ABCC9O60706 1549 aa26.14■■□□□ 1.77
SGSM3-211ENST00000481028 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
SGSM3-211ENST00000481028 NACADO15069 1562 aa25.32■■□□□ 1.64
SGSM3-211ENST00000481028 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
SGSM3-211ENST00000481028 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
SGSM3-211ENST00000481028 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
SGSM3-211ENST00000481028 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
SGSM3-211ENST00000481028 UNC13AQ9UPW8 1703 aa24.8■■□□□ 1.56
SGSM3-211ENST00000481028 SCRIBQ14160 1630 aa24.61■■□□□ 1.53
SGSM3-211ENST00000481028 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
SGSM3-211ENST00000481028 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
SGSM3-211ENST00000481028 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
SGSM3-211ENST00000481028 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
SGSM3-211ENST00000481028 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
SGSM3-211ENST00000481028 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
SGSM3-211ENST00000481028 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
SGSM3-211ENST00000481028 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
SGSM3-211ENST00000481028 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
SGSM3-211ENST00000481028 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
SGSM3-211ENST00000481028 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
SGSM3-211ENST00000481028 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
SGSM3-211ENST00000481028 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
SGSM3-211ENST00000481028 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
SGSM3-211ENST00000481028 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
SGSM3-211ENST00000481028 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
SGSM3-211ENST00000481028 WIZO95785 1651 aa23.25■■□□□ 1.31
SGSM3-211ENST00000481028 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
SGSM3-211ENST00000481028 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
SGSM3-211ENST00000481028 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
SGSM3-211ENST00000481028 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
SGSM3-211ENST00000481028 NESP48681 1621 aa22.71■■□□□ 1.23
SGSM3-211ENST00000481028 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
SGSM3-211ENST00000481028 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
SGSM3-211ENST00000481028 CFTRP13569 1480 aa22.61■■□□□ 1.21
SGSM3-211ENST00000481028 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
SGSM3-211ENST00000481028 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
SGSM3-211ENST00000481028 CUX2O14529 1486 aa22.51■■□□□ 1.19
SGSM3-211ENST00000481028 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
SGSM3-211ENST00000481028 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
SGSM3-211ENST00000481028 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
SGSM3-211ENST00000481028 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
SGSM3-211ENST00000481028 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
SGSM3-211ENST00000481028 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
SGSM3-211ENST00000481028 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
SGSM3-211ENST00000481028 WDR62O43379 1518 aa22.24■■□□□ 1.15
SGSM3-211ENST00000481028 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
SGSM3-211ENST00000481028 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
SGSM3-211ENST00000481028 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.13
SGSM3-211ENST00000481028 ABCC8Q09428 1581 aa22.08■■□□□ 1.12
SGSM3-211ENST00000481028 CUX1P39880 1505 aa22.02■■□□□ 1.12
SGSM3-211ENST00000481028 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
SGSM3-211ENST00000481028 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
SGSM3-211ENST00000481028 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
SGSM3-211ENST00000481028 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
SGSM3-211ENST00000481028 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SGSM3-211ENST00000481028 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.09
SGSM3-211ENST00000481028 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
SGSM3-211ENST00000481028 IFT140Q96RY7 1462 aa21.87■■□□□ 1.09
SGSM3-211ENST00000481028 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
SGSM3-211ENST00000481028 SOGA1O94964 1423 aa21.79■■□□□ 1.08
SGSM3-211ENST00000481028 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
SGSM3-211ENST00000481028 WDR97A6NE52 1622 aa21.77■■□□□ 1.07
SGSM3-211ENST00000481028 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
SGSM3-211ENST00000481028 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
SGSM3-211ENST00000481028 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
SGSM3-211ENST00000481028 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
SGSM3-211ENST00000481028 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
SGSM3-211ENST00000481028 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
SGSM3-211ENST00000481028 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
SGSM3-211ENST00000481028 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
SGSM3-211ENST00000481028 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
SGSM3-211ENST00000481028 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
SGSM3-211ENST00000481028 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
SGSM3-211ENST00000481028 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.03
SGSM3-211ENST00000481028 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
SGSM3-211ENST00000481028 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
SGSM3-211ENST00000481028 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
SGSM3-211ENST00000481028 CHD1O14646 1710 aa21.41■■□□□ 1.02
SGSM3-211ENST00000481028 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
SGSM3-211ENST00000481028 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
SGSM3-211ENST00000481028 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
SGSM3-211ENST00000481028 IGF1RP08069 1367 aa21.35■■□□□ 1.01
SGSM3-211ENST00000481028 FHAD1B1AJZ9 1412 aa21.31■■□□□ 1
SGSM3-211ENST00000481028 CUL7Q14999 1698 aa21.28■■□□□ 1
SGSM3-211ENST00000481028 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
SGSM3-211ENST00000481028 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
SGSM3-211ENST00000481028 FBLN2P98095 1184 aa21.24■□□□□ 0.99
SGSM3-211ENST00000481028 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
SGSM3-211ENST00000481028 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
SGSM3-211ENST00000481028 NUP160Q12769 1436 aa21.19■□□□□ 0.98
SGSM3-211ENST00000481028 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
SGSM3-211ENST00000481028 EEA1Q15075 1411 aa21.16■□□□□ 0.98
SGSM3-211ENST00000481028 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
SGSM3-211ENST00000481028 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
SGSM3-211ENST00000481028 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
SGSM3-211ENST00000481028 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
SGSM3-211ENST00000481028 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
SGSM3-211ENST00000481028 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms