RNA–Protein interactions for RNA: ENST00000480784.1

NEB-211, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-211ENST00000480784 NISCHQ9Y2I1 1504 aa34■■■■□ 3.03
NEB-211ENST00000480784 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
NEB-211ENST00000480784 ABCC9O60706 1549 aa29.54■■■□□ 2.32
NEB-211ENST00000480784 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
NEB-211ENST00000480784 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
NEB-211ENST00000480784 NACADO15069 1562 aa28.32■■■□□ 2.12
NEB-211ENST00000480784 RB1CC1Q8TDY2 1594 aa28.32■■■□□ 2.12
NEB-211ENST00000480784 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
NEB-211ENST00000480784 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
NEB-211ENST00000480784 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
NEB-211ENST00000480784 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
NEB-211ENST00000480784 SCRIBQ14160 1630 aa27.53■■■□□ 2
NEB-211ENST00000480784 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
NEB-211ENST00000480784 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
NEB-211ENST00000480784 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
NEB-211ENST00000480784 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
NEB-211ENST00000480784 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
NEB-211ENST00000480784 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
NEB-211ENST00000480784 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
NEB-211ENST00000480784 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
NEB-211ENST00000480784 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
NEB-211ENST00000480784 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
NEB-211ENST00000480784 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
NEB-211ENST00000480784 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
NEB-211ENST00000480784 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
NEB-211ENST00000480784 HMGXB3Q12766 1538 aa26■■□□□ 1.75
NEB-211ENST00000480784 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
NEB-211ENST00000480784 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
NEB-211ENST00000480784 WIZO95785 1651 aa25.9■■□□□ 1.74
NEB-211ENST00000480784 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
NEB-211ENST00000480784 NESP48681 1621 aa25.59■■□□□ 1.69
NEB-211ENST00000480784 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
NEB-211ENST00000480784 SUPT5HO00267 1087 aaKnown RBP25.44■■□□□ 1.66
NEB-211ENST00000480784 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
NEB-211ENST00000480784 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
NEB-211ENST00000480784 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
NEB-211ENST00000480784 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
NEB-211ENST00000480784 CFTRP13569 1480 aa25.31■■□□□ 1.64
NEB-211ENST00000480784 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
NEB-211ENST00000480784 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
NEB-211ENST00000480784 CUX2O14529 1486 aa25.09■■□□□ 1.61
NEB-211ENST00000480784 THOC2Q8NI27 1593 aaKnown RBP25.08■■□□□ 1.61
NEB-211ENST00000480784 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
NEB-211ENST00000480784 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
NEB-211ENST00000480784 WDR62O43379 1518 aa24.93■■□□□ 1.58
NEB-211ENST00000480784 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
NEB-211ENST00000480784 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
NEB-211ENST00000480784 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
NEB-211ENST00000480784 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
NEB-211ENST00000480784 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
NEB-211ENST00000480784 CUX1P39880 1505 aa24.61■■□□□ 1.53
NEB-211ENST00000480784 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
NEB-211ENST00000480784 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
NEB-211ENST00000480784 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
NEB-211ENST00000480784 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
NEB-211ENST00000480784 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
NEB-211ENST00000480784 SOGA1O94964 1423 aa24.48■■□□□ 1.51
NEB-211ENST00000480784 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
NEB-211ENST00000480784 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
NEB-211ENST00000480784 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.5
NEB-211ENST00000480784 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
NEB-211ENST00000480784 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
NEB-211ENST00000480784 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
NEB-211ENST00000480784 TOP2BQ02880 1626 aa24.33■■□□□ 1.49
NEB-211ENST00000480784 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
NEB-211ENST00000480784 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
NEB-211ENST00000480784 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
NEB-211ENST00000480784 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
NEB-211ENST00000480784 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
NEB-211ENST00000480784 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
NEB-211ENST00000480784 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
NEB-211ENST00000480784 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
NEB-211ENST00000480784 FBLN2P98095 1184 aa24.1■■□□□ 1.45
NEB-211ENST00000480784 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
NEB-211ENST00000480784 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
NEB-211ENST00000480784 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
NEB-211ENST00000480784 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
NEB-211ENST00000480784 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
NEB-211ENST00000480784 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
NEB-211ENST00000480784 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
NEB-211ENST00000480784 CHD1O14646 1710 aa23.93■■□□□ 1.42
NEB-211ENST00000480784 ERICH3Q5RHP9 1530 aa23.92■■□□□ 1.42
NEB-211ENST00000480784 IGF1RP08069 1367 aa23.91■■□□□ 1.42
NEB-211ENST00000480784 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
NEB-211ENST00000480784 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
NEB-211ENST00000480784 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
NEB-211ENST00000480784 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
NEB-211ENST00000480784 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
NEB-211ENST00000480784 CLASP1Q7Z460 1538 aa23.76■■□□□ 1.39
NEB-211ENST00000480784 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
NEB-211ENST00000480784 NUP160Q12769 1436 aa23.75■■□□□ 1.39
NEB-211ENST00000480784 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
NEB-211ENST00000480784 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
NEB-211ENST00000480784 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
NEB-211ENST00000480784 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
NEB-211ENST00000480784 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
NEB-211ENST00000480784 CUL7Q14999 1698 aa23.64■■□□□ 1.38
NEB-211ENST00000480784 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
NEB-211ENST00000480784 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
NEB-211ENST00000480784 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms