RNA–Protein interactions for RNA: ENST00000480166.3

RN7SL88P-201, Transcript of RNA, 7SL, cytoplasmic 88, pseudogene, humanhuman

BASIC

Gene RN7SL88P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL88P-201ENST00000480166 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
RN7SL88P-201ENST00000480166 ABCC9O60706 1549 aa14.48□□□□□ -0.09
RN7SL88P-201ENST00000480166 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
RN7SL88P-201ENST00000480166 ZCCHC6Q5VYS8 1495 aaKnown RBP13.92□□□□□ -0.18
RN7SL88P-201ENST00000480166 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
RN7SL88P-201ENST00000480166 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
RN7SL88P-201ENST00000480166 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
RN7SL88P-201ENST00000480166 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
RN7SL88P-201ENST00000480166 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
RN7SL88P-201ENST00000480166 NACADO15069 1562 aa13.53□□□□□ -0.24
RN7SL88P-201ENST00000480166 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
RN7SL88P-201ENST00000480166 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
RN7SL88P-201ENST00000480166 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
RN7SL88P-201ENST00000480166 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
RN7SL88P-201ENST00000480166 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
RN7SL88P-201ENST00000480166 BICRAQ9NZM4 1560 aa13.29□□□□□ -0.28
RN7SL88P-201ENST00000480166 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
RN7SL88P-201ENST00000480166 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
RN7SL88P-201ENST00000480166 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
RN7SL88P-201ENST00000480166 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
RN7SL88P-201ENST00000480166 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
RN7SL88P-201ENST00000480166 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
RN7SL88P-201ENST00000480166 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
RN7SL88P-201ENST00000480166 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
RN7SL88P-201ENST00000480166 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
RN7SL88P-201ENST00000480166 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
RN7SL88P-201ENST00000480166 WIZO95785 1651 aa12.71□□□□□ -0.37
RN7SL88P-201ENST00000480166 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
RN7SL88P-201ENST00000480166 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
RN7SL88P-201ENST00000480166 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
RN7SL88P-201ENST00000480166 CUX2O14529 1486 aa12.52□□□□□ -0.41
RN7SL88P-201ENST00000480166 NCAPD3P42695 1498 aa12.5□□□□□ -0.41
RN7SL88P-201ENST00000480166 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
RN7SL88P-201ENST00000480166 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
RN7SL88P-201ENST00000480166 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.41
RN7SL88P-201ENST00000480166 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
RN7SL88P-201ENST00000480166 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
RN7SL88P-201ENST00000480166 NESP48681 1621 aa12.38□□□□□ -0.43
RN7SL88P-201ENST00000480166 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
RN7SL88P-201ENST00000480166 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
RN7SL88P-201ENST00000480166 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
RN7SL88P-201ENST00000480166 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
RN7SL88P-201ENST00000480166 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
RN7SL88P-201ENST00000480166 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
RN7SL88P-201ENST00000480166 CFTRP13569 1480 aa12.14□□□□□ -0.47
RN7SL88P-201ENST00000480166 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
RN7SL88P-201ENST00000480166 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
RN7SL88P-201ENST00000480166 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
RN7SL88P-201ENST00000480166 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
RN7SL88P-201ENST00000480166 WDR62O43379 1518 aa12.06□□□□□ -0.48
RN7SL88P-201ENST00000480166 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
RN7SL88P-201ENST00000480166 FAM9AQ8IZU1 332 aaPredicted RBP12.01□□□□□ -0.49
RN7SL88P-201ENST00000480166 CEP164Q9UPV0 1460 aa12.01□□□□□ -0.49
RN7SL88P-201ENST00000480166 CUX1P39880 1505 aa12.01□□□□□ -0.49
RN7SL88P-201ENST00000480166 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
RN7SL88P-201ENST00000480166 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
RN7SL88P-201ENST00000480166 SOGA1O94964 1423 aa11.96□□□□□ -0.49
RN7SL88P-201ENST00000480166 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.5
RN7SL88P-201ENST00000480166 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
RN7SL88P-201ENST00000480166 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
RN7SL88P-201ENST00000480166 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
RN7SL88P-201ENST00000480166 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
RN7SL88P-201ENST00000480166 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
RN7SL88P-201ENST00000480166 TOPBP1Q92547 1522 aa11.86□□□□□ -0.51
RN7SL88P-201ENST00000480166 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
RN7SL88P-201ENST00000480166 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
RN7SL88P-201ENST00000480166 EEA1Q15075 1411 aa11.82□□□□□ -0.52
RN7SL88P-201ENST00000480166 POLA1P09884 1462 aaPredicted RBP11.81□□□□□ -0.52
RN7SL88P-201ENST00000480166 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
RN7SL88P-201ENST00000480166 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
RN7SL88P-201ENST00000480166 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
RN7SL88P-201ENST00000480166 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
RN7SL88P-201ENST00000480166 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
RN7SL88P-201ENST00000480166 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
RN7SL88P-201ENST00000480166 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
RN7SL88P-201ENST00000480166 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
RN7SL88P-201ENST00000480166 ARHGEF11O15085 1522 aa11.74□□□□□ -0.53
RN7SL88P-201ENST00000480166 PHF23Q9BUL5 403 aaPredicted RBP11.73□□□□□ -0.53
RN7SL88P-201ENST00000480166 ABCA10Q8WWZ4 1543 aa11.72□□□□□ -0.53
RN7SL88P-201ENST00000480166 KIF21BO75037 1637 aa11.71□□□□□ -0.53
RN7SL88P-201ENST00000480166 GOLGA3Q08378 1498 aa11.71□□□□□ -0.53
RN7SL88P-201ENST00000480166 WDR97A6NE52 1622 aa11.71□□□□□ -0.54
RN7SL88P-201ENST00000480166 RAPGEF2Q9Y4G8 1499 aa11.7□□□□□ -0.54
RN7SL88P-201ENST00000480166 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
RN7SL88P-201ENST00000480166 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
RN7SL88P-201ENST00000480166 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
RN7SL88P-201ENST00000480166 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
RN7SL88P-201ENST00000480166 IGF1RP08069 1367 aa11.67□□□□□ -0.54
RN7SL88P-201ENST00000480166 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
RN7SL88P-201ENST00000480166 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
RN7SL88P-201ENST00000480166 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
RN7SL88P-201ENST00000480166 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
RN7SL88P-201ENST00000480166 TNIKQ9UKE5 1360 aa11.65□□□□□ -0.55
RN7SL88P-201ENST00000480166 CHD1O14646 1710 aa11.63□□□□□ -0.55
RN7SL88P-201ENST00000480166 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
RN7SL88P-201ENST00000480166 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
RN7SL88P-201ENST00000480166 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
RN7SL88P-201ENST00000480166 FBLN2P98095 1184 aa11.62□□□□□ -0.55
RN7SL88P-201ENST00000480166 GAPVD1Q14C86 1478 aa11.62□□□□□ -0.55
RN7SL88P-201ENST00000480166 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms