RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
HCLS1-206ENST00000479994 ABCC9O60706 1549 aa25.43■■□□□ 1.66
HCLS1-206ENST00000479994 DNAJC5BQ9UF47 199 aa25.02■■□□□ 1.6
HCLS1-206ENST00000479994 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
HCLS1-206ENST00000479994 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
HCLS1-206ENST00000479994 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
HCLS1-206ENST00000479994 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
HCLS1-206ENST00000479994 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
HCLS1-206ENST00000479994 NACADO15069 1562 aa23.15■■□□□ 1.3
HCLS1-206ENST00000479994 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
HCLS1-206ENST00000479994 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
HCLS1-206ENST00000479994 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
HCLS1-206ENST00000479994 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
HCLS1-206ENST00000479994 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.2
HCLS1-206ENST00000479994 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
HCLS1-206ENST00000479994 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
HCLS1-206ENST00000479994 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
HCLS1-206ENST00000479994 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
HCLS1-206ENST00000479994 CUX2O14529 1486 aa22.39■■□□□ 1.17
HCLS1-206ENST00000479994 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
HCLS1-206ENST00000479994 ERCC6Q03468 1493 aa22■■□□□ 1.11
HCLS1-206ENST00000479994 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
HCLS1-206ENST00000479994 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
HCLS1-206ENST00000479994 NESP48681 1621 aa21.51■■□□□ 1.03
HCLS1-206ENST00000479994 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
HCLS1-206ENST00000479994 SMARCA2P51531 1590 aa21.28■■□□□ 1
HCLS1-206ENST00000479994 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
HCLS1-206ENST00000479994 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
HCLS1-206ENST00000479994 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
HCLS1-206ENST00000479994 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
HCLS1-206ENST00000479994 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
HCLS1-206ENST00000479994 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
HCLS1-206ENST00000479994 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
HCLS1-206ENST00000479994 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
HCLS1-206ENST00000479994 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
HCLS1-206ENST00000479994 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
HCLS1-206ENST00000479994 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
HCLS1-206ENST00000479994 WDR62O43379 1518 aa20.93■□□□□ 0.94
HCLS1-206ENST00000479994 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
HCLS1-206ENST00000479994 MRC2Q9UBG0 1479 aa20.92■□□□□ 0.94
HCLS1-206ENST00000479994 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
HCLS1-206ENST00000479994 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
HCLS1-206ENST00000479994 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
HCLS1-206ENST00000479994 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
HCLS1-206ENST00000479994 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
HCLS1-206ENST00000479994 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
HCLS1-206ENST00000479994 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
HCLS1-206ENST00000479994 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
HCLS1-206ENST00000479994 ILDR1Q86SU0 546 aaPredicted RBP20.6■□□□□ 0.89
HCLS1-206ENST00000479994 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
HCLS1-206ENST00000479994 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
HCLS1-206ENST00000479994 WIZO95785 1651 aa20.57■□□□□ 0.88
HCLS1-206ENST00000479994 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
HCLS1-206ENST00000479994 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
HCLS1-206ENST00000479994 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
HCLS1-206ENST00000479994 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
HCLS1-206ENST00000479994 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
HCLS1-206ENST00000479994 CHD1O14646 1710 aa20.3■□□□□ 0.84
HCLS1-206ENST00000479994 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
HCLS1-206ENST00000479994 CFTRP13569 1480 aa20.19■□□□□ 0.82
HCLS1-206ENST00000479994 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
HCLS1-206ENST00000479994 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
HCLS1-206ENST00000479994 FBLN2P98095 1184 aa20.09■□□□□ 0.81
HCLS1-206ENST00000479994 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
HCLS1-206ENST00000479994 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.79
HCLS1-206ENST00000479994 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
HCLS1-206ENST00000479994 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
HCLS1-206ENST00000479994 KDM4FA0A1W2PPD8 638 aa19.93■□□□□ 0.78
HCLS1-206ENST00000479994 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
HCLS1-206ENST00000479994 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
HCLS1-206ENST00000479994 KIF13AQ9H1H9 1805 aa19.84■□□□□ 0.77
HCLS1-206ENST00000479994 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
HCLS1-206ENST00000479994 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
HCLS1-206ENST00000479994 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
HCLS1-206ENST00000479994 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
HCLS1-206ENST00000479994 CHMP7Q8WUX9 453 aaPredicted RBP19.72■□□□□ 0.75
HCLS1-206ENST00000479994 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
HCLS1-206ENST00000479994 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
HCLS1-206ENST00000479994 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
HCLS1-206ENST00000479994 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
HCLS1-206ENST00000479994 HECW2Q9P2P5 1572 aa19.61■□□□□ 0.73
HCLS1-206ENST00000479994 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
HCLS1-206ENST00000479994 FBXO41Q8TF61 875 aa19.61■□□□□ 0.73
HCLS1-206ENST00000479994 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
HCLS1-206ENST00000479994 KDM6BO15054 1643 aa19.57■□□□□ 0.72
HCLS1-206ENST00000479994 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
HCLS1-206ENST00000479994 SOGA1O94964 1423 aa19.53■□□□□ 0.72
HCLS1-206ENST00000479994 BIVM-ERCC5R4GMW8 1640 aa19.53■□□□□ 0.72
HCLS1-206ENST00000479994 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
HCLS1-206ENST00000479994 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
HCLS1-206ENST00000479994 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
HCLS1-206ENST00000479994 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
HCLS1-206ENST00000479994 LMTK3Q96Q04 1460 aa19.48■□□□□ 0.71
HCLS1-206ENST00000479994 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
HCLS1-206ENST00000479994 ADGRL1O94910 1474 aa19.46■□□□□ 0.71
HCLS1-206ENST00000479994 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
HCLS1-206ENST00000479994 CUX1P39880 1505 aa19.43■□□□□ 0.7
HCLS1-206ENST00000479994 DIP2BQ9P265 1576 aa19.41■□□□□ 0.7
HCLS1-206ENST00000479994 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
HCLS1-206ENST00000479994 TSPOAP1O95153 1857 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 316.2 ms