RNA–Protein interactions for RNA: ENST00000479880.1

CSF3-205, Transcript of colony stimulating factor 3, humanhuman

TSL 3

Gene CSF3, Length 947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-205ENST00000479880 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
CSF3-205ENST00000479880 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
CSF3-205ENST00000479880 ABCC9O60706 1549 aa32.22■■■□□ 2.75
CSF3-205ENST00000479880 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
CSF3-205ENST00000479880 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
CSF3-205ENST00000479880 NACADO15069 1562 aa30.89■■■□□ 2.54
CSF3-205ENST00000479880 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
CSF3-205ENST00000479880 MYO15BQ96JP2 1530 aa30.67■■■□□ 2.5
CSF3-205ENST00000479880 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
CSF3-205ENST00000479880 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
CSF3-205ENST00000479880 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
CSF3-205ENST00000479880 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
CSF3-205ENST00000479880 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
CSF3-205ENST00000479880 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
CSF3-205ENST00000479880 SHROOM4Q9ULL8 1493 aa29.59■■■□□ 2.33
CSF3-205ENST00000479880 EIF4G1Q04637 1599 aaKnown RBP29.19■■■□□ 2.26
CSF3-205ENST00000479880 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
CSF3-205ENST00000479880 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
CSF3-205ENST00000479880 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
CSF3-205ENST00000479880 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
CSF3-205ENST00000479880 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
CSF3-205ENST00000479880 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
CSF3-205ENST00000479880 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
CSF3-205ENST00000479880 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
CSF3-205ENST00000479880 PEG3Q9GZU2 1588 aa28.36■■■□□ 2.13
CSF3-205ENST00000479880 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
CSF3-205ENST00000479880 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
CSF3-205ENST00000479880 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
CSF3-205ENST00000479880 WIZO95785 1651 aa28.24■■■□□ 2.11
CSF3-205ENST00000479880 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
CSF3-205ENST00000479880 NESP48681 1621 aa27.88■■■□□ 2.05
CSF3-205ENST00000479880 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
CSF3-205ENST00000479880 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
CSF3-205ENST00000479880 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
CSF3-205ENST00000479880 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
CSF3-205ENST00000479880 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
CSF3-205ENST00000479880 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
CSF3-205ENST00000479880 CFTRP13569 1480 aa27.55■■■□□ 2
CSF3-205ENST00000479880 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
CSF3-205ENST00000479880 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
CSF3-205ENST00000479880 CUX2O14529 1486 aa27.38■■□□□ 1.97
CSF3-205ENST00000479880 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
CSF3-205ENST00000479880 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
CSF3-205ENST00000479880 MRC2Q9UBG0 1479 aa27.31■■□□□ 1.96
CSF3-205ENST00000479880 PRDM2Q13029 1718 aa27.23■■□□□ 1.95
CSF3-205ENST00000479880 WDR62O43379 1518 aa27.17■■□□□ 1.94
CSF3-205ENST00000479880 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
CSF3-205ENST00000479880 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
CSF3-205ENST00000479880 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
CSF3-205ENST00000479880 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
CSF3-205ENST00000479880 IFT140Q96RY7 1462 aa26.79■■□□□ 1.88
CSF3-205ENST00000479880 CUX1P39880 1505 aa26.76■■□□□ 1.87
CSF3-205ENST00000479880 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
CSF3-205ENST00000479880 SOGA1O94964 1423 aa26.7■■□□□ 1.86
CSF3-205ENST00000479880 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
CSF3-205ENST00000479880 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
CSF3-205ENST00000479880 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
CSF3-205ENST00000479880 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
CSF3-205ENST00000479880 DNAJC5Q9H3Z4 198 aa26.62■■□□□ 1.85
CSF3-205ENST00000479880 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
CSF3-205ENST00000479880 AQRO60306 1485 aaKnown RBP eCLIP26.58■■□□□ 1.85
CSF3-205ENST00000479880 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
CSF3-205ENST00000479880 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
CSF3-205ENST00000479880 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
CSF3-205ENST00000479880 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
CSF3-205ENST00000479880 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
CSF3-205ENST00000479880 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
CSF3-205ENST00000479880 OSCARQ8IYS5 282 aa26.4■■□□□ 1.82
CSF3-205ENST00000479880 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
CSF3-205ENST00000479880 FBLN2P98095 1184 aa26.35■■□□□ 1.81
CSF3-205ENST00000479880 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
CSF3-205ENST00000479880 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
CSF3-205ENST00000479880 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
CSF3-205ENST00000479880 CHMP7Q8WUX9 453 aaPredicted RBP26.25■■□□□ 1.79
CSF3-205ENST00000479880 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
CSF3-205ENST00000479880 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
CSF3-205ENST00000479880 PBRM1Q86U86 1689 aa26.2■■□□□ 1.78
CSF3-205ENST00000479880 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
CSF3-205ENST00000479880 CHD1O14646 1710 aa26.17■■□□□ 1.78
CSF3-205ENST00000479880 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
CSF3-205ENST00000479880 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
CSF3-205ENST00000479880 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
CSF3-205ENST00000479880 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
CSF3-205ENST00000479880 IGF1RP08069 1367 aa26.02■■□□□ 1.76
CSF3-205ENST00000479880 ADAMTS12P58397 1594 aa26■■□□□ 1.75
CSF3-205ENST00000479880 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
CSF3-205ENST00000479880 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
CSF3-205ENST00000479880 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
CSF3-205ENST00000479880 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
CSF3-205ENST00000479880 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
CSF3-205ENST00000479880 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
CSF3-205ENST00000479880 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
CSF3-205ENST00000479880 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
CSF3-205ENST00000479880 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
CSF3-205ENST00000479880 NUP160Q12769 1436 aa25.84■■□□□ 1.73
CSF3-205ENST00000479880 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
CSF3-205ENST00000479880 CUL7Q14999 1698 aa25.82■■□□□ 1.72
CSF3-205ENST00000479880 CYB5RLQ6IPT4 315 aa25.77■■□□□ 1.72
CSF3-205ENST00000479880 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
CSF3-205ENST00000479880 RAPGEF2Q9Y4G8 1499 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms