RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 NISCHQ9Y2I1 1504 aa25.74■■□□□ 1.71
APTX-223ENST00000479656 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
APTX-223ENST00000479656 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
APTX-223ENST00000479656 ABCC9O60706 1549 aa21.51■■□□□ 1.03
APTX-223ENST00000479656 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
APTX-223ENST00000479656 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
APTX-223ENST00000479656 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
APTX-223ENST00000479656 NACADO15069 1562 aa21.01■□□□□ 0.95
APTX-223ENST00000479656 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
APTX-223ENST00000479656 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
APTX-223ENST00000479656 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
APTX-223ENST00000479656 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
APTX-223ENST00000479656 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
APTX-223ENST00000479656 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
APTX-223ENST00000479656 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
APTX-223ENST00000479656 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
APTX-223ENST00000479656 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
APTX-223ENST00000479656 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
APTX-223ENST00000479656 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
APTX-223ENST00000479656 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
APTX-223ENST00000479656 WIZO95785 1651 aa19.72■□□□□ 0.75
APTX-223ENST00000479656 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
APTX-223ENST00000479656 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
APTX-223ENST00000479656 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
APTX-223ENST00000479656 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
APTX-223ENST00000479656 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
APTX-223ENST00000479656 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
APTX-223ENST00000479656 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
APTX-223ENST00000479656 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
APTX-223ENST00000479656 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
APTX-223ENST00000479656 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
APTX-223ENST00000479656 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
APTX-223ENST00000479656 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
APTX-223ENST00000479656 CFTRP13569 1480 aa18.93■□□□□ 0.62
APTX-223ENST00000479656 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
APTX-223ENST00000479656 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
APTX-223ENST00000479656 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
APTX-223ENST00000479656 NESP48681 1621 aa18.83■□□□□ 0.6
APTX-223ENST00000479656 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
APTX-223ENST00000479656 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
APTX-223ENST00000479656 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
APTX-223ENST00000479656 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
APTX-223ENST00000479656 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
APTX-223ENST00000479656 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
APTX-223ENST00000479656 CUX1P39880 1505 aa18.6■□□□□ 0.57
APTX-223ENST00000479656 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
APTX-223ENST00000479656 TOP2BQ02880 1626 aa18.58■□□□□ 0.57
APTX-223ENST00000479656 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
APTX-223ENST00000479656 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
APTX-223ENST00000479656 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
APTX-223ENST00000479656 SOGA1O94964 1423 aa18.49■□□□□ 0.55
APTX-223ENST00000479656 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
APTX-223ENST00000479656 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
APTX-223ENST00000479656 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
APTX-223ENST00000479656 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
APTX-223ENST00000479656 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
APTX-223ENST00000479656 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
APTX-223ENST00000479656 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
APTX-223ENST00000479656 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
APTX-223ENST00000479656 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
APTX-223ENST00000479656 EEA1Q15075 1411 aa18.36■□□□□ 0.53
APTX-223ENST00000479656 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
APTX-223ENST00000479656 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
APTX-223ENST00000479656 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.53
APTX-223ENST00000479656 WDR62O43379 1518 aa18.3■□□□□ 0.52
APTX-223ENST00000479656 CUX2O14529 1486 aa18.29■□□□□ 0.52
APTX-223ENST00000479656 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
APTX-223ENST00000479656 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
APTX-223ENST00000479656 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
APTX-223ENST00000479656 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
APTX-223ENST00000479656 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
APTX-223ENST00000479656 IGF1RP08069 1367 aa18.18■□□□□ 0.5
APTX-223ENST00000479656 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
APTX-223ENST00000479656 IFT140Q96RY7 1462 aa18.16■□□□□ 0.5
APTX-223ENST00000479656 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
APTX-223ENST00000479656 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
APTX-223ENST00000479656 UBTFP17480 764 aaKnown RBP18.12■□□□□ 0.49
APTX-223ENST00000479656 KIF21BO75037 1637 aa18.11■□□□□ 0.49
APTX-223ENST00000479656 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.49
APTX-223ENST00000479656 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
APTX-223ENST00000479656 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
APTX-223ENST00000479656 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
APTX-223ENST00000479656 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
APTX-223ENST00000479656 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
APTX-223ENST00000479656 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
APTX-223ENST00000479656 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
APTX-223ENST00000479656 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
APTX-223ENST00000479656 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
APTX-223ENST00000479656 CUL7Q14999 1698 aa17.97■□□□□ 0.47
APTX-223ENST00000479656 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
APTX-223ENST00000479656 RANGAP1P46060 587 aaPredicted RBP17.92■□□□□ 0.46
APTX-223ENST00000479656 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
APTX-223ENST00000479656 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
APTX-223ENST00000479656 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
APTX-223ENST00000479656 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
APTX-223ENST00000479656 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
APTX-223ENST00000479656 CLIP1P30622 1438 aa17.83■□□□□ 0.45
APTX-223ENST00000479656 FBLN2P98095 1184 aa17.82■□□□□ 0.44
APTX-223ENST00000479656 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
APTX-223ENST00000479656 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms