RNA–Protein interactions for RNA: ENST00000479002.1

CAD-208, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-208ENST00000479002 NISCHQ9Y2I1 1504 aa38.46■■■■□ 3.75
CAD-208ENST00000479002 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
CAD-208ENST00000479002 ABCC9O60706 1549 aa32.82■■■□□ 2.84
CAD-208ENST00000479002 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
CAD-208ENST00000479002 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
CAD-208ENST00000479002 DCAF1Q9Y4B6 1507 aa31.86■■■□□ 2.69
CAD-208ENST00000479002 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
CAD-208ENST00000479002 NACADO15069 1562 aa31.84■■■□□ 2.69
CAD-208ENST00000479002 RB1CC1Q8TDY2 1594 aa31.74■■■□□ 2.67
CAD-208ENST00000479002 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
CAD-208ENST00000479002 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
CAD-208ENST00000479002 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
CAD-208ENST00000479002 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.52
CAD-208ENST00000479002 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
CAD-208ENST00000479002 EIF4G1Q04637 1599 aaKnown RBP29.93■■■□□ 2.38
CAD-208ENST00000479002 CECR2Q9BXF3 1484 aa29.93■■■□□ 2.38
CAD-208ENST00000479002 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
CAD-208ENST00000479002 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
CAD-208ENST00000479002 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
CAD-208ENST00000479002 CC2D2AQ9P2K1 1620 aa29.68■■■□□ 2.34
CAD-208ENST00000479002 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
CAD-208ENST00000479002 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
CAD-208ENST00000479002 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
CAD-208ENST00000479002 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
CAD-208ENST00000479002 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
CAD-208ENST00000479002 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
CAD-208ENST00000479002 WIZO95785 1651 aa29.29■■■□□ 2.28
CAD-208ENST00000479002 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
CAD-208ENST00000479002 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
CAD-208ENST00000479002 SUPT5HO00267 1087 aaKnown RBP29.05■■■□□ 2.24
CAD-208ENST00000479002 TOP2AP11388 1531 aaKnown RBP29.04■■■□□ 2.24
CAD-208ENST00000479002 CCDC88BA6NC98 1476 aa28.73■■■□□ 2.19
CAD-208ENST00000479002 CADPSQ9ULU8 1353 aa28.59■■■□□ 2.17
CAD-208ENST00000479002 NESP48681 1621 aa28.53■■■□□ 2.16
CAD-208ENST00000479002 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
CAD-208ENST00000479002 CFTRP13569 1480 aa28.5■■■□□ 2.15
CAD-208ENST00000479002 PDS5BQ9NTI5 1447 aa28.34■■■□□ 2.13
CAD-208ENST00000479002 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
CAD-208ENST00000479002 FANCD2Q9BXW9 1451 aa28.22■■■□□ 2.11
CAD-208ENST00000479002 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
CAD-208ENST00000479002 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
CAD-208ENST00000479002 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
CAD-208ENST00000479002 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
CAD-208ENST00000479002 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
CAD-208ENST00000479002 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
CAD-208ENST00000479002 WDR62O43379 1518 aa27.89■■■□□ 2.06
CAD-208ENST00000479002 ABCC8Q09428 1581 aa27.86■■■□□ 2.05
CAD-208ENST00000479002 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
CAD-208ENST00000479002 CUX2O14529 1486 aa27.8■■■□□ 2.04
CAD-208ENST00000479002 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
CAD-208ENST00000479002 WRNQ14191 1432 aaPredicted RBP eCLIP27.78■■■□□ 2.04
CAD-208ENST00000479002 CUX1P39880 1505 aa27.77■■■□□ 2.04
CAD-208ENST00000479002 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
CAD-208ENST00000479002 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
CAD-208ENST00000479002 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
CAD-208ENST00000479002 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
CAD-208ENST00000479002 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
CAD-208ENST00000479002 IFT140Q96RY7 1462 aa27.55■■■□□ 2
CAD-208ENST00000479002 SOGA1O94964 1423 aa27.53■■■□□ 2
CAD-208ENST00000479002 RAD54L2Q9Y4B4 1467 aa27.5■■□□□ 1.99
CAD-208ENST00000479002 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
CAD-208ENST00000479002 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
CAD-208ENST00000479002 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
CAD-208ENST00000479002 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
CAD-208ENST00000479002 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
CAD-208ENST00000479002 TDRD9Q8NDG6 1382 aaKnown RBP27.33■■□□□ 1.97
CAD-208ENST00000479002 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
CAD-208ENST00000479002 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.964e-8■■■■■ 34.1
CAD-208ENST00000479002 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
CAD-208ENST00000479002 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
CAD-208ENST00000479002 ABCA5Q8WWZ7 1642 aa27.19■■□□□ 1.94
CAD-208ENST00000479002 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
CAD-208ENST00000479002 GRIN2BQ13224 1484 aa27.14■■□□□ 1.94
CAD-208ENST00000479002 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
CAD-208ENST00000479002 ERICH3Q5RHP9 1530 aa27.05■■□□□ 1.92
CAD-208ENST00000479002 IGF1RP08069 1367 aa27.04■■□□□ 1.92
CAD-208ENST00000479002 SNAPC4Q5SXM2 1469 aa27.03■■□□□ 1.92
CAD-208ENST00000479002 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
CAD-208ENST00000479002 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
CAD-208ENST00000479002 EEA1Q15075 1411 aa26.95■■□□□ 1.9
CAD-208ENST00000479002 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
CAD-208ENST00000479002 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
CAD-208ENST00000479002 ADAMTS12P58397 1594 aa26.89■■□□□ 1.9
CAD-208ENST00000479002 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
CAD-208ENST00000479002 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
CAD-208ENST00000479002 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
CAD-208ENST00000479002 FBLN2P98095 1184 aa26.85■■□□□ 1.89
CAD-208ENST00000479002 CUL7Q14999 1698 aa26.83■■□□□ 1.89
CAD-208ENST00000479002 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
CAD-208ENST00000479002 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
CAD-208ENST00000479002 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
CAD-208ENST00000479002 OSCARQ8IYS5 282 aa26.76■■□□□ 1.87
CAD-208ENST00000479002 CHD1O14646 1710 aa26.76■■□□□ 1.87
CAD-208ENST00000479002 RAPGEF2Q9Y4G8 1499 aa26.74■■□□□ 1.87
CAD-208ENST00000479002 NUP160Q12769 1436 aa26.67■■□□□ 1.86
CAD-208ENST00000479002 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
CAD-208ENST00000479002 KIF21BO75037 1637 aa26.58■■□□□ 1.85
CAD-208ENST00000479002 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
CAD-208ENST00000479002 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
CAD-208ENST00000479002 GOLGA3Q08378 1498 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms