RNA–Protein interactions for RNA: ENST00000478547.1

EIF3D-211, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

TSL 3

Gene EIF3D, Length 452 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-211ENST00000478547 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.54
EIF3D-211ENST00000478547 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
EIF3D-211ENST00000478547 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
EIF3D-211ENST00000478547 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
EIF3D-211ENST00000478547 ABCC9O60706 1549 aa15.89■□□□□ 0.13
EIF3D-211ENST00000478547 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
EIF3D-211ENST00000478547 NACADO15069 1562 aa15.35■□□□□ 0.05
EIF3D-211ENST00000478547 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
EIF3D-211ENST00000478547 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
EIF3D-211ENST00000478547 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
EIF3D-211ENST00000478547 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
EIF3D-211ENST00000478547 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.03
EIF3D-211ENST00000478547 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
EIF3D-211ENST00000478547 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
EIF3D-211ENST00000478547 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
EIF3D-211ENST00000478547 UNC13AQ9UPW8 1703 aa14.85□□□□□ -0.03
EIF3D-211ENST00000478547 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
EIF3D-211ENST00000478547 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
EIF3D-211ENST00000478547 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
EIF3D-211ENST00000478547 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.09
EIF3D-211ENST00000478547 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
EIF3D-211ENST00000478547 FOXD1Q16676 465 aa14.34□□□□□ -0.11
EIF3D-211ENST00000478547 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
EIF3D-211ENST00000478547 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
EIF3D-211ENST00000478547 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
EIF3D-211ENST00000478547 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
EIF3D-211ENST00000478547 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
EIF3D-211ENST00000478547 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
EIF3D-211ENST00000478547 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
EIF3D-211ENST00000478547 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
EIF3D-211ENST00000478547 HMGXB3Q12766 1538 aa14.09□□□□□ -0.15
EIF3D-211ENST00000478547 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
EIF3D-211ENST00000478547 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
EIF3D-211ENST00000478547 WIZO95785 1651 aa13.95□□□□□ -0.18
EIF3D-211ENST00000478547 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
EIF3D-211ENST00000478547 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
EIF3D-211ENST00000478547 NESP48681 1621 aa13.77□□□□□ -0.21
EIF3D-211ENST00000478547 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
EIF3D-211ENST00000478547 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
EIF3D-211ENST00000478547 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
EIF3D-211ENST00000478547 CFTRP13569 1480 aa13.71□□□□□ -0.21
EIF3D-211ENST00000478547 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
EIF3D-211ENST00000478547 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
EIF3D-211ENST00000478547 CUX2O14529 1486 aa13.6□□□□□ -0.23
EIF3D-211ENST00000478547 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
EIF3D-211ENST00000478547 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
EIF3D-211ENST00000478547 MSH5O43196 834 aa13.53□□□□□ -0.24
EIF3D-211ENST00000478547 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
EIF3D-211ENST00000478547 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
EIF3D-211ENST00000478547 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
EIF3D-211ENST00000478547 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
EIF3D-211ENST00000478547 WDR62O43379 1518 aa13.48□□□□□ -0.25
EIF3D-211ENST00000478547 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
EIF3D-211ENST00000478547 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
EIF3D-211ENST00000478547 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
EIF3D-211ENST00000478547 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
EIF3D-211ENST00000478547 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
EIF3D-211ENST00000478547 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
EIF3D-211ENST00000478547 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
EIF3D-211ENST00000478547 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
EIF3D-211ENST00000478547 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
EIF3D-211ENST00000478547 CUX1P39880 1505 aa13.26□□□□□ -0.29
EIF3D-211ENST00000478547 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
EIF3D-211ENST00000478547 SOGA1O94964 1423 aa13.24□□□□□ -0.29
EIF3D-211ENST00000478547 ADRA2BP18089 450 aa13.23□□□□□ -0.29
EIF3D-211ENST00000478547 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
EIF3D-211ENST00000478547 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
EIF3D-211ENST00000478547 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
EIF3D-211ENST00000478547 TARBP1Q13395 1621 aaKnown RBP13.2□□□□□ -0.3
EIF3D-211ENST00000478547 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
EIF3D-211ENST00000478547 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
EIF3D-211ENST00000478547 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
EIF3D-211ENST00000478547 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.3
EIF3D-211ENST00000478547 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
EIF3D-211ENST00000478547 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
EIF3D-211ENST00000478547 ABCA10Q8WWZ4 1543 aa13.13□□□□□ -0.31
EIF3D-211ENST00000478547 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
EIF3D-211ENST00000478547 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
EIF3D-211ENST00000478547 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
EIF3D-211ENST00000478547 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
EIF3D-211ENST00000478547 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
EIF3D-211ENST00000478547 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
EIF3D-211ENST00000478547 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
EIF3D-211ENST00000478547 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
EIF3D-211ENST00000478547 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
EIF3D-211ENST00000478547 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
EIF3D-211ENST00000478547 FBLN2P98095 1184 aa12.98□□□□□ -0.33
EIF3D-211ENST00000478547 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
EIF3D-211ENST00000478547 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
EIF3D-211ENST00000478547 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.33
EIF3D-211ENST00000478547 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
EIF3D-211ENST00000478547 IGF1RP08069 1367 aa12.95□□□□□ -0.34
EIF3D-211ENST00000478547 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
EIF3D-211ENST00000478547 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
EIF3D-211ENST00000478547 GRIN2AQ12879 1464 aa12.87□□□□□ -0.35
EIF3D-211ENST00000478547 CHD1O14646 1710 aa12.87□□□□□ -0.35
EIF3D-211ENST00000478547 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
EIF3D-211ENST00000478547 NUP160Q12769 1436 aa12.86□□□□□ -0.35
EIF3D-211ENST00000478547 CARMIL1Q5VZK9 1371 aa12.85□□□□□ -0.35
EIF3D-211ENST00000478547 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms