RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
TRAF3IP3-213ENST00000478359 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
TRAF3IP3-213ENST00000478359 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
TRAF3IP3-213ENST00000478359 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
TRAF3IP3-213ENST00000478359 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
TRAF3IP3-213ENST00000478359 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
TRAF3IP3-213ENST00000478359 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
TRAF3IP3-213ENST00000478359 NACADO15069 1562 aa21.99■■□□□ 1.11
TRAF3IP3-213ENST00000478359 ABCC9O60706 1549 aa21.94■■□□□ 1.1
TRAF3IP3-213ENST00000478359 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
TRAF3IP3-213ENST00000478359 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
TRAF3IP3-213ENST00000478359 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
TRAF3IP3-213ENST00000478359 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
TRAF3IP3-213ENST00000478359 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
TRAF3IP3-213ENST00000478359 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
TRAF3IP3-213ENST00000478359 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
TRAF3IP3-213ENST00000478359 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
TRAF3IP3-213ENST00000478359 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
TRAF3IP3-213ENST00000478359 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
TRAF3IP3-213ENST00000478359 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
TRAF3IP3-213ENST00000478359 WIZO95785 1651 aa20.92■□□□□ 0.94
TRAF3IP3-213ENST00000478359 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
TRAF3IP3-213ENST00000478359 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRAF3IP3-213ENST00000478359 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
TRAF3IP3-213ENST00000478359 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
TRAF3IP3-213ENST00000478359 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
TRAF3IP3-213ENST00000478359 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
TRAF3IP3-213ENST00000478359 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
TRAF3IP3-213ENST00000478359 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
TRAF3IP3-213ENST00000478359 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
TRAF3IP3-213ENST00000478359 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
TRAF3IP3-213ENST00000478359 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
TRAF3IP3-213ENST00000478359 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
TRAF3IP3-213ENST00000478359 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
TRAF3IP3-213ENST00000478359 EEA1Q15075 1411 aa20.08■□□□□ 0.81
TRAF3IP3-213ENST00000478359 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
TRAF3IP3-213ENST00000478359 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
TRAF3IP3-213ENST00000478359 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
TRAF3IP3-213ENST00000478359 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
TRAF3IP3-213ENST00000478359 CFTRP13569 1480 aa19.91■□□□□ 0.78
TRAF3IP3-213ENST00000478359 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
TRAF3IP3-213ENST00000478359 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
TRAF3IP3-213ENST00000478359 SOGA1O94964 1423 aa19.88■□□□□ 0.77
TRAF3IP3-213ENST00000478359 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
TRAF3IP3-213ENST00000478359 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
TRAF3IP3-213ENST00000478359 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
TRAF3IP3-213ENST00000478359 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
TRAF3IP3-213ENST00000478359 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
TRAF3IP3-213ENST00000478359 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
TRAF3IP3-213ENST00000478359 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
TRAF3IP3-213ENST00000478359 KIF21BO75037 1637 aa19.75■□□□□ 0.75
TRAF3IP3-213ENST00000478359 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
TRAF3IP3-213ENST00000478359 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
TRAF3IP3-213ENST00000478359 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
TRAF3IP3-213ENST00000478359 CUX1P39880 1505 aa19.68■□□□□ 0.74
TRAF3IP3-213ENST00000478359 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
TRAF3IP3-213ENST00000478359 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
TRAF3IP3-213ENST00000478359 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP3-213ENST00000478359 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
TRAF3IP3-213ENST00000478359 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
TRAF3IP3-213ENST00000478359 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
TRAF3IP3-213ENST00000478359 HRCP23327 699 aa19.54■□□□□ 0.72
TRAF3IP3-213ENST00000478359 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
TRAF3IP3-213ENST00000478359 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
TRAF3IP3-213ENST00000478359 RAPGEF2Q9Y4G8 1499 aa19.47■□□□□ 0.71
TRAF3IP3-213ENST00000478359 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
TRAF3IP3-213ENST00000478359 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
TRAF3IP3-213ENST00000478359 CLIP1P30622 1438 aa19.42■□□□□ 0.7
TRAF3IP3-213ENST00000478359 CUX2O14529 1486 aa19.37■□□□□ 0.69
TRAF3IP3-213ENST00000478359 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
TRAF3IP3-213ENST00000478359 NESP48681 1621 aa19.36■□□□□ 0.69
TRAF3IP3-213ENST00000478359 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
TRAF3IP3-213ENST00000478359 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
TRAF3IP3-213ENST00000478359 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
TRAF3IP3-213ENST00000478359 IGF1RP08069 1367 aa19.29■□□□□ 0.68
TRAF3IP3-213ENST00000478359 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
TRAF3IP3-213ENST00000478359 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
TRAF3IP3-213ENST00000478359 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
TRAF3IP3-213ENST00000478359 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
TRAF3IP3-213ENST00000478359 CUL7Q14999 1698 aa19.2■□□□□ 0.66
TRAF3IP3-213ENST00000478359 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
TRAF3IP3-213ENST00000478359 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
TRAF3IP3-213ENST00000478359 APLP2Q06481 763 aa19.2■□□□□ 0.66
TRAF3IP3-213ENST00000478359 KIF21AQ7Z4S6 1674 aa19.19■□□□□ 0.66
TRAF3IP3-213ENST00000478359 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
TRAF3IP3-213ENST00000478359 ARAP1Q96P48 1450 aa19.14■□□□□ 0.66
TRAF3IP3-213ENST00000478359 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
TRAF3IP3-213ENST00000478359 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
TRAF3IP3-213ENST00000478359 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
TRAF3IP3-213ENST00000478359 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
TRAF3IP3-213ENST00000478359 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
TRAF3IP3-213ENST00000478359 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
TRAF3IP3-213ENST00000478359 CTTNBP2Q8WZ74 1663 aa19.02■□□□□ 0.63
TRAF3IP3-213ENST00000478359 EFCAB5A4FU69 1503 aa19.01■□□□□ 0.63
TRAF3IP3-213ENST00000478359 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
TRAF3IP3-213ENST00000478359 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
TRAF3IP3-213ENST00000478359 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
TRAF3IP3-213ENST00000478359 WDR62O43379 1518 aa18.95■□□□□ 0.62
TRAF3IP3-213ENST00000478359 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
TRAF3IP3-213ENST00000478359 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms