RNA–Protein interactions for RNA: ENST00000478310.1

SLC13A4-205, Transcript of solute carrier family 13 member 4, humanhuman

TSL 2

Gene SLC13A4, Length 1,720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-205ENST00000478310 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
SLC13A4-205ENST00000478310 CCDC180Q9P1Z9 1646 aa34.87■■■■□ 3.17
SLC13A4-205ENST00000478310 ABCC9O60706 1549 aa33.46■■■□□ 2.95
SLC13A4-205ENST00000478310 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
SLC13A4-205ENST00000478310 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
SLC13A4-205ENST00000478310 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
SLC13A4-205ENST00000478310 MYO15BQ96JP2 1530 aa32.65■■■□□ 2.82
SLC13A4-205ENST00000478310 NACADO15069 1562 aa32.61■■■□□ 2.81
SLC13A4-205ENST00000478310 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
SLC13A4-205ENST00000478310 SHROOM4Q9ULL8 1493 aa32.32■■■□□ 2.76
SLC13A4-205ENST00000478310 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
SLC13A4-205ENST00000478310 UNC13AQ9UPW8 1703 aa31.75■■■□□ 2.67
SLC13A4-205ENST00000478310 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
SLC13A4-205ENST00000478310 BICRAQ9NZM4 1560 aa31.49■■■□□ 2.63
SLC13A4-205ENST00000478310 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
SLC13A4-205ENST00000478310 SUPT5HO00267 1087 aaKnown RBP30.9■■■□□ 2.54
SLC13A4-205ENST00000478310 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
SLC13A4-205ENST00000478310 RSF1Q96T23 1441 aaPredicted RBP30.78■■■□□ 2.52
SLC13A4-205ENST00000478310 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
SLC13A4-205ENST00000478310 SMARCA4P51532 1647 aa30.71■■■□□ 2.51
SLC13A4-205ENST00000478310 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
SLC13A4-205ENST00000478310 WIZO95785 1651 aa30.52■■■□□ 2.48
SLC13A4-205ENST00000478310 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
SLC13A4-205ENST00000478310 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
SLC13A4-205ENST00000478310 SMARCA2P51531 1590 aa30.26■■■□□ 2.44
SLC13A4-205ENST00000478310 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
SLC13A4-205ENST00000478310 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
SLC13A4-205ENST00000478310 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
SLC13A4-205ENST00000478310 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
SLC13A4-205ENST00000478310 HMGXB3Q12766 1538 aa30.01■■■□□ 2.4
SLC13A4-205ENST00000478310 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.38
SLC13A4-205ENST00000478310 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
SLC13A4-205ENST00000478310 CADPSQ9ULU8 1353 aa29.35■■■□□ 2.29
SLC13A4-205ENST00000478310 CFTRP13569 1480 aa29.35■■■□□ 2.29
SLC13A4-205ENST00000478310 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
SLC13A4-205ENST00000478310 NESP48681 1621 aa29.25■■■□□ 2.27
SLC13A4-205ENST00000478310 LAMC3Q9Y6N6 1575 aa29.14■■■□□ 2.26
SLC13A4-205ENST00000478310 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
SLC13A4-205ENST00000478310 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
SLC13A4-205ENST00000478310 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
SLC13A4-205ENST00000478310 FANCD2Q9BXW9 1451 aa29.02■■■□□ 2.24
SLC13A4-205ENST00000478310 WRNQ14191 1432 aaPredicted RBP eCLIP28.98■■■□□ 2.23
SLC13A4-205ENST00000478310 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
SLC13A4-205ENST00000478310 SYNJ1O43426 1573 aa28.87■■■□□ 2.21
SLC13A4-205ENST00000478310 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
SLC13A4-205ENST00000478310 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
SLC13A4-205ENST00000478310 CUX1P39880 1505 aa28.82■■■□□ 2.2
SLC13A4-205ENST00000478310 TOP2BQ02880 1626 aa28.76■■■□□ 2.19
SLC13A4-205ENST00000478310 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
SLC13A4-205ENST00000478310 ERCC6Q03468 1493 aa28.71■■■□□ 2.19
SLC13A4-205ENST00000478310 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
SLC13A4-205ENST00000478310 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
SLC13A4-205ENST00000478310 DNMBPQ6XZF7 1577 aa28.65■■■□□ 2.18
SLC13A4-205ENST00000478310 MRC2Q9UBG0 1479 aa28.61■■■□□ 2.17
SLC13A4-205ENST00000478310 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
SLC13A4-205ENST00000478310 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
SLC13A4-205ENST00000478310 SOGA1O94964 1423 aa28.52■■■□□ 2.16
SLC13A4-205ENST00000478310 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
SLC13A4-205ENST00000478310 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
SLC13A4-205ENST00000478310 WDR62O43379 1518 aa28.46■■■□□ 2.15
SLC13A4-205ENST00000478310 RUSC2Q8N2Y8 1516 aa28.46■■■□□ 2.15
SLC13A4-205ENST00000478310 RAD54L2Q9Y4B4 1467 aa28.43■■■□□ 2.14
SLC13A4-205ENST00000478310 CUX2O14529 1486 aa28.32■■■□□ 2.12
SLC13A4-205ENST00000478310 EEA1Q15075 1411 aa28.3■■■□□ 2.12
SLC13A4-205ENST00000478310 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
SLC13A4-205ENST00000478310 KIF27Q86VH2 1401 aa28.28■■■□□ 2.12
SLC13A4-205ENST00000478310 CSRNP3Q8WYN3 585 aa28.27■■■□□ 2.12
SLC13A4-205ENST00000478310 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
SLC13A4-205ENST00000478310 TARBP1Q13395 1621 aaKnown RBP28.24■■■□□ 2.11
SLC13A4-205ENST00000478310 EHMT2Q96KQ7 1210 aa28.21■■■□□ 2.11
SLC13A4-205ENST00000478310 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.11
SLC13A4-205ENST00000478310 WDR97A6NE52 1622 aa28.2■■■□□ 2.1
SLC13A4-205ENST00000478310 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
SLC13A4-205ENST00000478310 IGF1RP08069 1367 aa28.11■■■□□ 2.09
SLC13A4-205ENST00000478310 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
SLC13A4-205ENST00000478310 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.09
SLC13A4-205ENST00000478310 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
SLC13A4-205ENST00000478310 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
SLC13A4-205ENST00000478310 PRXQ9BXM0 1461 aa27.98■■■□□ 2.07
SLC13A4-205ENST00000478310 KIF21BO75037 1637 aa27.95■■■□□ 2.07
SLC13A4-205ENST00000478310 CARMIL1Q5VZK9 1371 aa27.95■■■□□ 2.06
SLC13A4-205ENST00000478310 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.06
SLC13A4-205ENST00000478310 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
SLC13A4-205ENST00000478310 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
SLC13A4-205ENST00000478310 GOLGA3Q08378 1498 aa27.92■■■□□ 2.06
SLC13A4-205ENST00000478310 GRIN2BQ13224 1484 aa27.91■■■□□ 2.06
SLC13A4-205ENST00000478310 PBRM1Q86U86 1689 aa27.9■■■□□ 2.06
SLC13A4-205ENST00000478310 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.06
SLC13A4-205ENST00000478310 CUL7Q14999 1698 aa27.84■■■□□ 2.05
SLC13A4-205ENST00000478310 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
SLC13A4-205ENST00000478310 TNIKQ9UKE5 1360 aa27.77■■■□□ 2.04
SLC13A4-205ENST00000478310 FHAD1B1AJZ9 1412 aa27.76■■■□□ 2.03
SLC13A4-205ENST00000478310 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
SLC13A4-205ENST00000478310 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.02
SLC13A4-205ENST00000478310 FBLN2P98095 1184 aa27.64■■■□□ 2.01
SLC13A4-205ENST00000478310 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
SLC13A4-205ENST00000478310 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
SLC13A4-205ENST00000478310 SYNJ2O15056 1496 aa27.61■■■□□ 2.01
SLC13A4-205ENST00000478310 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
SLC13A4-205ENST00000478310 GRIN2AQ12879 1464 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms