RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
GFM1-206ENST00000478251 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
GFM1-206ENST00000478251 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
GFM1-206ENST00000478251 ABCC9O60706 1549 aa22.04■■□□□ 1.12
GFM1-206ENST00000478251 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
GFM1-206ENST00000478251 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
GFM1-206ENST00000478251 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
GFM1-206ENST00000478251 NACADO15069 1562 aa21.52■■□□□ 1.04
GFM1-206ENST00000478251 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
GFM1-206ENST00000478251 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
GFM1-206ENST00000478251 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
GFM1-206ENST00000478251 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
GFM1-206ENST00000478251 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
GFM1-206ENST00000478251 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
GFM1-206ENST00000478251 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
GFM1-206ENST00000478251 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
GFM1-206ENST00000478251 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
GFM1-206ENST00000478251 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
GFM1-206ENST00000478251 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
GFM1-206ENST00000478251 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
GFM1-206ENST00000478251 WIZO95785 1651 aa20.27■□□□□ 0.84
GFM1-206ENST00000478251 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
GFM1-206ENST00000478251 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
GFM1-206ENST00000478251 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
GFM1-206ENST00000478251 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
GFM1-206ENST00000478251 SMARCA2P51531 1590 aa19.98■□□□□ 0.79
GFM1-206ENST00000478251 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
GFM1-206ENST00000478251 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
GFM1-206ENST00000478251 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
GFM1-206ENST00000478251 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
GFM1-206ENST00000478251 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
GFM1-206ENST00000478251 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
GFM1-206ENST00000478251 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
GFM1-206ENST00000478251 CFTRP13569 1480 aa19.4■□□□□ 0.7
GFM1-206ENST00000478251 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
GFM1-206ENST00000478251 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
GFM1-206ENST00000478251 NESP48681 1621 aa19.34■□□□□ 0.69
GFM1-206ENST00000478251 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
GFM1-206ENST00000478251 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
GFM1-206ENST00000478251 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
GFM1-206ENST00000478251 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
GFM1-206ENST00000478251 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
GFM1-206ENST00000478251 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
GFM1-206ENST00000478251 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
GFM1-206ENST00000478251 CUX1P39880 1505 aa19.11■□□□□ 0.65
GFM1-206ENST00000478251 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
GFM1-206ENST00000478251 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.64
GFM1-206ENST00000478251 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
GFM1-206ENST00000478251 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.64
GFM1-206ENST00000478251 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
GFM1-206ENST00000478251 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
GFM1-206ENST00000478251 DNMBPQ6XZF7 1577 aa18.95■□□□□ 0.62
GFM1-206ENST00000478251 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
GFM1-206ENST00000478251 SOGA1O94964 1423 aa18.93■□□□□ 0.62
GFM1-206ENST00000478251 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
GFM1-206ENST00000478251 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
GFM1-206ENST00000478251 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
GFM1-206ENST00000478251 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
GFM1-206ENST00000478251 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
GFM1-206ENST00000478251 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
GFM1-206ENST00000478251 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
GFM1-206ENST00000478251 WDR62O43379 1518 aa18.8■□□□□ 0.6
GFM1-206ENST00000478251 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
GFM1-206ENST00000478251 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
GFM1-206ENST00000478251 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
GFM1-206ENST00000478251 CUX2O14529 1486 aa18.73■□□□□ 0.59
GFM1-206ENST00000478251 TARBP1Q13395 1621 aaKnown RBP18.72■□□□□ 0.59
GFM1-206ENST00000478251 EEA1Q15075 1411 aa18.71■□□□□ 0.59
GFM1-206ENST00000478251 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
GFM1-206ENST00000478251 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
GFM1-206ENST00000478251 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
GFM1-206ENST00000478251 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
GFM1-206ENST00000478251 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
GFM1-206ENST00000478251 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
GFM1-206ENST00000478251 KIF21BO75037 1637 aa18.58■□□□□ 0.57
GFM1-206ENST00000478251 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
GFM1-206ENST00000478251 IGF1RP08069 1367 aa18.57■□□□□ 0.56
GFM1-206ENST00000478251 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
GFM1-206ENST00000478251 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
GFM1-206ENST00000478251 RAPGEF2Q9Y4G8 1499 aa18.55■□□□□ 0.56
GFM1-206ENST00000478251 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
GFM1-206ENST00000478251 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
GFM1-206ENST00000478251 PBRM1Q86U86 1689 aa18.51■□□□□ 0.55
GFM1-206ENST00000478251 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
GFM1-206ENST00000478251 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
GFM1-206ENST00000478251 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
GFM1-206ENST00000478251 CUL7Q14999 1698 aa18.44■□□□□ 0.54
GFM1-206ENST00000478251 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
GFM1-206ENST00000478251 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
GFM1-206ENST00000478251 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
GFM1-206ENST00000478251 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
GFM1-206ENST00000478251 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
GFM1-206ENST00000478251 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
GFM1-206ENST00000478251 CEP162Q5TB80 1403 aa18.33■□□□□ 0.52
GFM1-206ENST00000478251 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
GFM1-206ENST00000478251 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.51
GFM1-206ENST00000478251 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
GFM1-206ENST00000478251 SYNJ2O15056 1496 aa18.21■□□□□ 0.5
GFM1-206ENST00000478251 GRIN2AQ12879 1464 aa18.21■□□□□ 0.5
GFM1-206ENST00000478251 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms