RNA–Protein interactions for RNA: ENST00000477866.1

CRIP3-205, Transcript of cysteine rich protein 3, humanhuman

TSL 2

Gene CRIP3, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-205ENST00000477866 NISCHQ9Y2I1 1504 aa23.96■■□□□ 1.43
CRIP3-205ENST00000477866 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
CRIP3-205ENST00000477866 ABCC9O60706 1549 aa20.04■□□□□ 0.8
CRIP3-205ENST00000477866 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
CRIP3-205ENST00000477866 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
CRIP3-205ENST00000477866 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
CRIP3-205ENST00000477866 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
CRIP3-205ENST00000477866 NACADO15069 1562 aa19.71■□□□□ 0.75
CRIP3-205ENST00000477866 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
CRIP3-205ENST00000477866 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
CRIP3-205ENST00000477866 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
CRIP3-205ENST00000477866 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
CRIP3-205ENST00000477866 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
CRIP3-205ENST00000477866 BICRAQ9NZM4 1560 aa18.8■□□□□ 0.6
CRIP3-205ENST00000477866 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
CRIP3-205ENST00000477866 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
CRIP3-205ENST00000477866 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
CRIP3-205ENST00000477866 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
CRIP3-205ENST00000477866 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
CRIP3-205ENST00000477866 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
CRIP3-205ENST00000477866 EIF4G1Q04637 1599 aaKnown RBP18.34■□□□□ 0.53
CRIP3-205ENST00000477866 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
CRIP3-205ENST00000477866 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
CRIP3-205ENST00000477866 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
CRIP3-205ENST00000477866 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
CRIP3-205ENST00000477866 WIZO95785 1651 aa18.18■□□□□ 0.5
CRIP3-205ENST00000477866 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
CRIP3-205ENST00000477866 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
CRIP3-205ENST00000477866 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
CRIP3-205ENST00000477866 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
CRIP3-205ENST00000477866 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
CRIP3-205ENST00000477866 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
CRIP3-205ENST00000477866 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
CRIP3-205ENST00000477866 CFTRP13569 1480 aa17.69■□□□□ 0.42
CRIP3-205ENST00000477866 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
CRIP3-205ENST00000477866 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
CRIP3-205ENST00000477866 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.41
CRIP3-205ENST00000477866 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
CRIP3-205ENST00000477866 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
CRIP3-205ENST00000477866 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
CRIP3-205ENST00000477866 NESP48681 1621 aa17.44■□□□□ 0.38
CRIP3-205ENST00000477866 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
CRIP3-205ENST00000477866 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
CRIP3-205ENST00000477866 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
CRIP3-205ENST00000477866 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
CRIP3-205ENST00000477866 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
CRIP3-205ENST00000477866 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
CRIP3-205ENST00000477866 CUX1P39880 1505 aa17.24■□□□□ 0.35
CRIP3-205ENST00000477866 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
CRIP3-205ENST00000477866 EEA1Q15075 1411 aa17.21■□□□□ 0.35
CRIP3-205ENST00000477866 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
CRIP3-205ENST00000477866 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
CRIP3-205ENST00000477866 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
CRIP3-205ENST00000477866 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
CRIP3-205ENST00000477866 SOGA1O94964 1423 aa17.16■□□□□ 0.34
CRIP3-205ENST00000477866 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
CRIP3-205ENST00000477866 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
CRIP3-205ENST00000477866 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
CRIP3-205ENST00000477866 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
CRIP3-205ENST00000477866 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
CRIP3-205ENST00000477866 WDR62O43379 1518 aa17.11■□□□□ 0.33
CRIP3-205ENST00000477866 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
CRIP3-205ENST00000477866 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
CRIP3-205ENST00000477866 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
CRIP3-205ENST00000477866 CUX2O14529 1486 aa17.03■□□□□ 0.32
CRIP3-205ENST00000477866 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
CRIP3-205ENST00000477866 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
CRIP3-205ENST00000477866 IGF1RP08069 1367 aa16.95■□□□□ 0.3
CRIP3-205ENST00000477866 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
CRIP3-205ENST00000477866 RUSC2Q8N2Y8 1516 aa16.94■□□□□ 0.3
CRIP3-205ENST00000477866 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
CRIP3-205ENST00000477866 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
CRIP3-205ENST00000477866 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
CRIP3-205ENST00000477866 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
CRIP3-205ENST00000477866 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
CRIP3-205ENST00000477866 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
CRIP3-205ENST00000477866 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
CRIP3-205ENST00000477866 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
CRIP3-205ENST00000477866 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
CRIP3-205ENST00000477866 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
CRIP3-205ENST00000477866 PRXQ9BXM0 1461 aa16.85■□□□□ 0.29
CRIP3-205ENST00000477866 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
CRIP3-205ENST00000477866 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
CRIP3-205ENST00000477866 KIF21BO75037 1637 aa16.8■□□□□ 0.28
CRIP3-205ENST00000477866 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
CRIP3-205ENST00000477866 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
CRIP3-205ENST00000477866 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
CRIP3-205ENST00000477866 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
CRIP3-205ENST00000477866 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
CRIP3-205ENST00000477866 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
CRIP3-205ENST00000477866 CUL7Q14999 1698 aa16.75■□□□□ 0.27
CRIP3-205ENST00000477866 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
CRIP3-205ENST00000477866 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
CRIP3-205ENST00000477866 FBLN2P98095 1184 aa16.68■□□□□ 0.26
CRIP3-205ENST00000477866 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
CRIP3-205ENST00000477866 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
CRIP3-205ENST00000477866 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
CRIP3-205ENST00000477866 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
CRIP3-205ENST00000477866 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
CRIP3-205ENST00000477866 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms