RNA–Protein interactions for RNA: ENST00000477823.1

CASK-212, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 3

Gene CASK, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-212ENST00000477823 NISCHQ9Y2I1 1504 aa17.68■□□□□ 0.42
CASK-212ENST00000477823 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
CASK-212ENST00000477823 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
CASK-212ENST00000477823 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
CASK-212ENST00000477823 ABCC9O60706 1549 aa15.11■□□□□ 0.01
CASK-212ENST00000477823 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
CASK-212ENST00000477823 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
CASK-212ENST00000477823 NACADO15069 1562 aa14.68□□□□□ -0.06
CASK-212ENST00000477823 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
CASK-212ENST00000477823 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
CASK-212ENST00000477823 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
CASK-212ENST00000477823 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
CASK-212ENST00000477823 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
CASK-212ENST00000477823 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
CASK-212ENST00000477823 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
CASK-212ENST00000477823 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
CASK-212ENST00000477823 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
CASK-212ENST00000477823 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
CASK-212ENST00000477823 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
CASK-212ENST00000477823 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
CASK-212ENST00000477823 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
CASK-212ENST00000477823 CC2D2AQ9P2K1 1620 aa13.71□□□□□ -0.22
CASK-212ENST00000477823 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
CASK-212ENST00000477823 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
CASK-212ENST00000477823 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
CASK-212ENST00000477823 SMARCA2P51531 1590 aa13.56□□□□□ -0.24
CASK-212ENST00000477823 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
CASK-212ENST00000477823 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
CASK-212ENST00000477823 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
CASK-212ENST00000477823 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
CASK-212ENST00000477823 WIZO95785 1651 aa13.5□□□□□ -0.25
CASK-212ENST00000477823 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
CASK-212ENST00000477823 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
CASK-212ENST00000477823 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
CASK-212ENST00000477823 FOXD1Q16676 465 aa13.36□□□□□ -0.27
CASK-212ENST00000477823 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
CASK-212ENST00000477823 SUPT5HO00267 1087 aaKnown RBP13.31□□□□□ -0.28
CASK-212ENST00000477823 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
CASK-212ENST00000477823 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
CASK-212ENST00000477823 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
CASK-212ENST00000477823 NESP48681 1621 aa13.13□□□□□ -0.31
CASK-212ENST00000477823 CFTRP13569 1480 aa13.1□□□□□ -0.31
CASK-212ENST00000477823 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
CASK-212ENST00000477823 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
CASK-212ENST00000477823 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
CASK-212ENST00000477823 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
CASK-212ENST00000477823 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
CASK-212ENST00000477823 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
CASK-212ENST00000477823 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.35
CASK-212ENST00000477823 MRC2Q9UBG0 1479 aa12.89□□□□□ -0.35
CASK-212ENST00000477823 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
CASK-212ENST00000477823 WDR62O43379 1518 aa12.84□□□□□ -0.35
CASK-212ENST00000477823 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.35
CASK-212ENST00000477823 CUX2O14529 1486 aa12.83□□□□□ -0.36
CASK-212ENST00000477823 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
CASK-212ENST00000477823 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
CASK-212ENST00000477823 ADRA2BP18089 450 aa12.8□□□□□ -0.36
CASK-212ENST00000477823 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
CASK-212ENST00000477823 CUX1P39880 1505 aa12.76□□□□□ -0.37
CASK-212ENST00000477823 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
CASK-212ENST00000477823 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
CASK-212ENST00000477823 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
CASK-212ENST00000477823 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
CASK-212ENST00000477823 POLA1P09884 1462 aaPredicted RBP12.69□□□□□ -0.38
CASK-212ENST00000477823 FGD5Q6ZNL6 1462 aa12.68□□□□□ -0.38
CASK-212ENST00000477823 IFT140Q96RY7 1462 aa12.67□□□□□ -0.38
CASK-212ENST00000477823 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
CASK-212ENST00000477823 SOGA1O94964 1423 aa12.66□□□□□ -0.38
CASK-212ENST00000477823 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
CASK-212ENST00000477823 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
CASK-212ENST00000477823 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
CASK-212ENST00000477823 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
CASK-212ENST00000477823 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
CASK-212ENST00000477823 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
CASK-212ENST00000477823 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
CASK-212ENST00000477823 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.4
CASK-212ENST00000477823 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
CASK-212ENST00000477823 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
CASK-212ENST00000477823 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
CASK-212ENST00000477823 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
CASK-212ENST00000477823 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
CASK-212ENST00000477823 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
CASK-212ENST00000477823 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
CASK-212ENST00000477823 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
CASK-212ENST00000477823 IGF1RP08069 1367 aa12.42□□□□□ -0.42
CASK-212ENST00000477823 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
CASK-212ENST00000477823 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
CASK-212ENST00000477823 CHD1O14646 1710 aa12.4□□□□□ -0.42
CASK-212ENST00000477823 CHMP7Q8WUX9 453 aaPredicted RBP12.38□□□□□ -0.43
CASK-212ENST00000477823 SYNJ2O15056 1496 aa12.38□□□□□ -0.43
CASK-212ENST00000477823 CUL7Q14999 1698 aa12.38□□□□□ -0.43
CASK-212ENST00000477823 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
CASK-212ENST00000477823 FBLN2P98095 1184 aa12.37□□□□□ -0.43
CASK-212ENST00000477823 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
CASK-212ENST00000477823 EEA1Q15075 1411 aa12.37□□□□□ -0.43
CASK-212ENST00000477823 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
CASK-212ENST00000477823 MSH5O43196 834 aa12.34□□□□□ -0.43
CASK-212ENST00000477823 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
CASK-212ENST00000477823 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
CASK-212ENST00000477823 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms