RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 NISCHQ9Y2I1 1504 aa37.74■■■■□ 3.63
COL11A2-206ENST00000477772 CCDC180Q9P1Z9 1646 aa33.29■■■□□ 2.92
COL11A2-206ENST00000477772 ABCC9O60706 1549 aa32.15■■■□□ 2.74
COL11A2-206ENST00000477772 ZCCHC6Q5VYS8 1495 aaKnown RBP31.54■■■□□ 2.64
COL11A2-206ENST00000477772 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
COL11A2-206ENST00000477772 DCAF1Q9Y4B6 1507 aa31.21■■■□□ 2.59
COL11A2-206ENST00000477772 NACADO15069 1562 aa31.18■■■□□ 2.58
COL11A2-206ENST00000477772 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
COL11A2-206ENST00000477772 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
COL11A2-206ENST00000477772 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
COL11A2-206ENST00000477772 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
COL11A2-206ENST00000477772 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
COL11A2-206ENST00000477772 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
COL11A2-206ENST00000477772 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
COL11A2-206ENST00000477772 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
COL11A2-206ENST00000477772 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
COL11A2-206ENST00000477772 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
COL11A2-206ENST00000477772 SMARCA4P51532 1647 aa29.18■■■□□ 2.26
COL11A2-206ENST00000477772 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
COL11A2-206ENST00000477772 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
COL11A2-206ENST00000477772 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
COL11A2-206ENST00000477772 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
COL11A2-206ENST00000477772 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
COL11A2-206ENST00000477772 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
COL11A2-206ENST00000477772 WIZO95785 1651 aa28.85■■■□□ 2.21
COL11A2-206ENST00000477772 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
COL11A2-206ENST00000477772 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
COL11A2-206ENST00000477772 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
COL11A2-206ENST00000477772 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
COL11A2-206ENST00000477772 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
COL11A2-206ENST00000477772 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.16
COL11A2-206ENST00000477772 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
COL11A2-206ENST00000477772 NESP48681 1621 aa28■■■□□ 2.07
COL11A2-206ENST00000477772 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
COL11A2-206ENST00000477772 CFTRP13569 1480 aa27.92■■■□□ 2.06
COL11A2-206ENST00000477772 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
COL11A2-206ENST00000477772 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
COL11A2-206ENST00000477772 PDS5BQ9NTI5 1447 aa27.7■■■□□ 2.03
COL11A2-206ENST00000477772 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
COL11A2-206ENST00000477772 FANCD2Q9BXW9 1451 aa27.66■■■□□ 2.02
COL11A2-206ENST00000477772 ERCC6Q03468 1493 aa27.62■■■□□ 2.01
COL11A2-206ENST00000477772 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
COL11A2-206ENST00000477772 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
COL11A2-206ENST00000477772 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
COL11A2-206ENST00000477772 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
COL11A2-206ENST00000477772 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
COL11A2-206ENST00000477772 WDR62O43379 1518 aa27.32■■□□□ 1.96
COL11A2-206ENST00000477772 CUX1P39880 1505 aa27.28■■□□□ 1.96
COL11A2-206ENST00000477772 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
COL11A2-206ENST00000477772 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
COL11A2-206ENST00000477772 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
COL11A2-206ENST00000477772 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
COL11A2-206ENST00000477772 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
COL11A2-206ENST00000477772 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
COL11A2-206ENST00000477772 CUX2O14529 1486 aa27.13■■□□□ 1.93
COL11A2-206ENST00000477772 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
COL11A2-206ENST00000477772 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
COL11A2-206ENST00000477772 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
COL11A2-206ENST00000477772 RAD54L2Q9Y4B4 1467 aa26.99■■□□□ 1.91
COL11A2-206ENST00000477772 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
COL11A2-206ENST00000477772 SOGA1O94964 1423 aa26.97■■□□□ 1.91
COL11A2-206ENST00000477772 TARBP1Q13395 1621 aaKnown RBP26.97■■□□□ 1.91
COL11A2-206ENST00000477772 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
COL11A2-206ENST00000477772 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
COL11A2-206ENST00000477772 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
COL11A2-206ENST00000477772 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
COL11A2-206ENST00000477772 TDRD9Q8NDG6 1382 aaKnown RBP26.79■■□□□ 1.88
COL11A2-206ENST00000477772 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.87
COL11A2-206ENST00000477772 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
COL11A2-206ENST00000477772 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
COL11A2-206ENST00000477772 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
COL11A2-206ENST00000477772 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
COL11A2-206ENST00000477772 KIF27Q86VH2 1401 aa26.63■■□□□ 1.85
COL11A2-206ENST00000477772 PBRM1Q86U86 1689 aa26.59■■□□□ 1.85
COL11A2-206ENST00000477772 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
COL11A2-206ENST00000477772 IGF1RP08069 1367 aa26.51■■□□□ 1.83
COL11A2-206ENST00000477772 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
COL11A2-206ENST00000477772 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
COL11A2-206ENST00000477772 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.82
COL11A2-206ENST00000477772 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
COL11A2-206ENST00000477772 EEA1Q15075 1411 aa26.43■■□□□ 1.82
COL11A2-206ENST00000477772 ADAMTS12P58397 1594 aa26.4■■□□□ 1.82
COL11A2-206ENST00000477772 CSRNP3Q8WYN3 585 aa26.37■■□□□ 1.81
COL11A2-206ENST00000477772 CUL7Q14999 1698 aa26.36■■□□□ 1.81
COL11A2-206ENST00000477772 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
COL11A2-206ENST00000477772 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
COL11A2-206ENST00000477772 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
COL11A2-206ENST00000477772 CHD1O14646 1710 aa26.32■■□□□ 1.8
COL11A2-206ENST00000477772 FBLN2P98095 1184 aa26.31■■□□□ 1.8
COL11A2-206ENST00000477772 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
COL11A2-206ENST00000477772 PRXQ9BXM0 1461 aa26.28■■□□□ 1.8
COL11A2-206ENST00000477772 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
COL11A2-206ENST00000477772 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
COL11A2-206ENST00000477772 KIF21BO75037 1637 aa26.16■■□□□ 1.78
COL11A2-206ENST00000477772 CEP170Q5SW79 1584 aa26.13■■□□□ 1.77
COL11A2-206ENST00000477772 NUP160Q12769 1436 aa26.12■■□□□ 1.77
COL11A2-206ENST00000477772 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
COL11A2-206ENST00000477772 EHMT2Q96KQ7 1210 aa26.09■■□□□ 1.77
COL11A2-206ENST00000477772 GOLGA3Q08378 1498 aa26.03■■□□□ 1.76
COL11A2-206ENST00000477772 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms