RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
NIFK-205ENST00000477693 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
NIFK-205ENST00000477693 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
NIFK-205ENST00000477693 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.97
NIFK-205ENST00000477693 ABCC9O60706 1549 aa20.63■□□□□ 0.89
NIFK-205ENST00000477693 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
NIFK-205ENST00000477693 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
NIFK-205ENST00000477693 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
NIFK-205ENST00000477693 NACADO15069 1562 aa19.87■□□□□ 0.77
NIFK-205ENST00000477693 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
NIFK-205ENST00000477693 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
NIFK-205ENST00000477693 DCAF8L2P0C7V8 631 aa19.76■□□□□ 0.75
NIFK-205ENST00000477693 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
NIFK-205ENST00000477693 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
NIFK-205ENST00000477693 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
NIFK-205ENST00000477693 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
NIFK-205ENST00000477693 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
NIFK-205ENST00000477693 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
NIFK-205ENST00000477693 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
NIFK-205ENST00000477693 FOXD1Q16676 465 aa18.78■□□□□ 0.6
NIFK-205ENST00000477693 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
NIFK-205ENST00000477693 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
NIFK-205ENST00000477693 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
NIFK-205ENST00000477693 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
NIFK-205ENST00000477693 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
NIFK-205ENST00000477693 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
NIFK-205ENST00000477693 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
NIFK-205ENST00000477693 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
NIFK-205ENST00000477693 SMARCA2P51531 1590 aa18.33■□□□□ 0.52
NIFK-205ENST00000477693 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
NIFK-205ENST00000477693 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
NIFK-205ENST00000477693 DNAJC5Q9H3Z4 198 aa18.29■□□□□ 0.52
NIFK-205ENST00000477693 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
NIFK-205ENST00000477693 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
NIFK-205ENST00000477693 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
NIFK-205ENST00000477693 WIZO95785 1651 aa18.09■□□□□ 0.49
NIFK-205ENST00000477693 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
NIFK-205ENST00000477693 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
NIFK-205ENST00000477693 NESP48681 1621 aa17.87■□□□□ 0.45
NIFK-205ENST00000477693 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
NIFK-205ENST00000477693 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
NIFK-205ENST00000477693 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
NIFK-205ENST00000477693 ADRA2BP18089 450 aa17.75■□□□□ 0.43
NIFK-205ENST00000477693 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
NIFK-205ENST00000477693 CFTRP13569 1480 aa17.71■□□□□ 0.43
NIFK-205ENST00000477693 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
NIFK-205ENST00000477693 CUX2O14529 1486 aa17.69■□□□□ 0.42
NIFK-205ENST00000477693 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
NIFK-205ENST00000477693 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
NIFK-205ENST00000477693 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
NIFK-205ENST00000477693 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
NIFK-205ENST00000477693 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
NIFK-205ENST00000477693 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
NIFK-205ENST00000477693 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
NIFK-205ENST00000477693 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
NIFK-205ENST00000477693 WDR62O43379 1518 aa17.5■□□□□ 0.39
NIFK-205ENST00000477693 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
NIFK-205ENST00000477693 MSH5O43196 834 aa17.33■□□□□ 0.36
NIFK-205ENST00000477693 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
NIFK-205ENST00000477693 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
NIFK-205ENST00000477693 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
NIFK-205ENST00000477693 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
NIFK-205ENST00000477693 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
NIFK-205ENST00000477693 CUX1P39880 1505 aa17.18■□□□□ 0.34
NIFK-205ENST00000477693 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
NIFK-205ENST00000477693 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
NIFK-205ENST00000477693 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
NIFK-205ENST00000477693 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
NIFK-205ENST00000477693 SOGA1O94964 1423 aa17.07■□□□□ 0.32
NIFK-205ENST00000477693 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
NIFK-205ENST00000477693 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
NIFK-205ENST00000477693 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
NIFK-205ENST00000477693 TOP2BQ02880 1626 aa17.04■□□□□ 0.32
NIFK-205ENST00000477693 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
NIFK-205ENST00000477693 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
NIFK-205ENST00000477693 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
NIFK-205ENST00000477693 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.317e-7■■■■■ 31
NIFK-205ENST00000477693 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
NIFK-205ENST00000477693 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
NIFK-205ENST00000477693 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
NIFK-205ENST00000477693 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
NIFK-205ENST00000477693 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
NIFK-205ENST00000477693 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
NIFK-205ENST00000477693 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
NIFK-205ENST00000477693 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
NIFK-205ENST00000477693 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
NIFK-205ENST00000477693 CHD1O14646 1710 aa16.8■□□□□ 0.28
NIFK-205ENST00000477693 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
NIFK-205ENST00000477693 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
NIFK-205ENST00000477693 FBLN2P98095 1184 aa16.76■□□□□ 0.27
NIFK-205ENST00000477693 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
NIFK-205ENST00000477693 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
NIFK-205ENST00000477693 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
NIFK-205ENST00000477693 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
NIFK-205ENST00000477693 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
NIFK-205ENST00000477693 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
NIFK-205ENST00000477693 IGF1RP08069 1367 aa16.64■□□□□ 0.26
NIFK-205ENST00000477693 NUP160Q12769 1436 aa16.62■□□□□ 0.25
NIFK-205ENST00000477693 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
NIFK-205ENST00000477693 RIMBP3CA6NJZ7 1639 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms