RNA–Protein interactions for RNA: ENST00000477324.6

XPC-206, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-206ENST00000477324 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
XPC-206ENST00000477324 CCDC180Q9P1Z9 1646 aa15.8■□□□□ 0.12
XPC-206ENST00000477324 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
XPC-206ENST00000477324 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.07
XPC-206ENST00000477324 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
XPC-206ENST00000477324 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
XPC-206ENST00000477324 ABCC9O60706 1549 aa14.86□□□□□ -0.03
XPC-206ENST00000477324 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
XPC-206ENST00000477324 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
XPC-206ENST00000477324 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
XPC-206ENST00000477324 NACADO15069 1562 aa14.62□□□□□ -0.07
XPC-206ENST00000477324 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
XPC-206ENST00000477324 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
XPC-206ENST00000477324 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
XPC-206ENST00000477324 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.13
XPC-206ENST00000477324 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
XPC-206ENST00000477324 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
XPC-206ENST00000477324 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
XPC-206ENST00000477324 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
XPC-206ENST00000477324 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.18
XPC-206ENST00000477324 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
XPC-206ENST00000477324 WIZO95785 1651 aa13.95□□□□□ -0.18
XPC-206ENST00000477324 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
XPC-206ENST00000477324 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
XPC-206ENST00000477324 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
XPC-206ENST00000477324 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
XPC-206ENST00000477324 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
XPC-206ENST00000477324 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
XPC-206ENST00000477324 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
XPC-206ENST00000477324 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
XPC-206ENST00000477324 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
XPC-206ENST00000477324 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
XPC-206ENST00000477324 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
XPC-206ENST00000477324 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
XPC-206ENST00000477324 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
XPC-206ENST00000477324 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
XPC-206ENST00000477324 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
XPC-206ENST00000477324 SYNJ1O43426 1573 aa13.2□□□□□ -0.3
XPC-206ENST00000477324 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
XPC-206ENST00000477324 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
XPC-206ENST00000477324 CFTRP13569 1480 aa13.16□□□□□ -0.3
XPC-206ENST00000477324 BIVM-ERCC5R4GMW8 1640 aa13.15□□□□□ -0.3
XPC-206ENST00000477324 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
XPC-206ENST00000477324 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
XPC-206ENST00000477324 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
XPC-206ENST00000477324 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
XPC-206ENST00000477324 CUX1P39880 1505 aa13.06□□□□□ -0.32
XPC-206ENST00000477324 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
XPC-206ENST00000477324 NESP48681 1621 aa13.06□□□□□ -0.32
XPC-206ENST00000477324 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
XPC-206ENST00000477324 SOGA1O94964 1423 aa13.04□□□□□ -0.32
XPC-206ENST00000477324 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.32
XPC-206ENST00000477324 EEA1Q15075 1411 aa13.02□□□□□ -0.33
XPC-206ENST00000477324 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.33
XPC-206ENST00000477324 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
XPC-206ENST00000477324 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
XPC-206ENST00000477324 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
XPC-206ENST00000477324 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
XPC-206ENST00000477324 KIF21BO75037 1637 aa12.93□□□□□ -0.34
XPC-206ENST00000477324 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
XPC-206ENST00000477324 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
XPC-206ENST00000477324 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
XPC-206ENST00000477324 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
XPC-206ENST00000477324 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
XPC-206ENST00000477324 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
XPC-206ENST00000477324 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
XPC-206ENST00000477324 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
XPC-206ENST00000477324 CUX2O14529 1486 aa12.84□□□□□ -0.35
XPC-206ENST00000477324 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
XPC-206ENST00000477324 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
XPC-206ENST00000477324 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
XPC-206ENST00000477324 RAPGEF2Q9Y4G8 1499 aa12.79□□□□□ -0.36
XPC-206ENST00000477324 TNIKQ9UKE5 1360 aa12.79□□□□□ -0.36
XPC-206ENST00000477324 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
XPC-206ENST00000477324 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
XPC-206ENST00000477324 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
XPC-206ENST00000477324 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
XPC-206ENST00000477324 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
XPC-206ENST00000477324 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
XPC-206ENST00000477324 CUL7Q14999 1698 aa12.73□□□□□ -0.37
XPC-206ENST00000477324 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
XPC-206ENST00000477324 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
XPC-206ENST00000477324 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
XPC-206ENST00000477324 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
XPC-206ENST00000477324 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.37
XPC-206ENST00000477324 WDR62O43379 1518 aa12.7□□□□□ -0.38
XPC-206ENST00000477324 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
XPC-206ENST00000477324 RANGAP1P46060 587 aaPredicted RBP12.68□□□□□ -0.38
XPC-206ENST00000477324 CLIP1P30622 1438 aa12.67□□□□□ -0.38
XPC-206ENST00000477324 IGF1RP08069 1367 aa12.66□□□□□ -0.38
XPC-206ENST00000477324 CARMIL1Q5VZK9 1371 aa12.65□□□□□ -0.38
XPC-206ENST00000477324 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
XPC-206ENST00000477324 TDRD9Q8NDG6 1382 aaKnown RBP12.63□□□□□ -0.39
XPC-206ENST00000477324 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
XPC-206ENST00000477324 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
XPC-206ENST00000477324 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
XPC-206ENST00000477324 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
XPC-206ENST00000477324 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
XPC-206ENST00000477324 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
XPC-206ENST00000477324 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms