RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
CCDC30-209ENST00000477155 CCDC180Q9P1Z9 1646 aa12.64□□□□□ -0.39
CCDC30-209ENST00000477155 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
CCDC30-209ENST00000477155 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
CCDC30-209ENST00000477155 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
CCDC30-209ENST00000477155 ABCC9O60706 1549 aa12.14□□□□□ -0.47
CCDC30-209ENST00000477155 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
CCDC30-209ENST00000477155 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
CCDC30-209ENST00000477155 MYO15BQ96JP2 1530 aa11.84□□□□□ -0.51
CCDC30-209ENST00000477155 NACADO15069 1562 aa11.82□□□□□ -0.52
CCDC30-209ENST00000477155 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
CCDC30-209ENST00000477155 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
CCDC30-209ENST00000477155 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC30-209ENST00000477155 CECR2Q9BXF3 1484 aa11.5□□□□□ -0.57
CCDC30-209ENST00000477155 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
CCDC30-209ENST00000477155 RSF1Q96T23 1441 aaPredicted RBP11.47□□□□□ -0.57
CCDC30-209ENST00000477155 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.58
CCDC30-209ENST00000477155 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
CCDC30-209ENST00000477155 BAZ1AQ9NRL2 1556 aaPredicted RBP11.31□□□□□ -0.6
CCDC30-209ENST00000477155 WIZO95785 1651 aa11.3□□□□□ -0.6
CCDC30-209ENST00000477155 CHIC1Q5VXU3 224 aa11.29□□□□□ -0.6
CCDC30-209ENST00000477155 SMARCA4P51532 1647 aa11.25□□□□□ -0.61
CCDC30-209ENST00000477155 TOP2AP11388 1531 aaKnown RBP11.11□□□□□ -0.63
CCDC30-209ENST00000477155 ATAD2BQ9ULI0 1458 aa11.09□□□□□ -0.63
CCDC30-209ENST00000477155 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
CCDC30-209ENST00000477155 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
CCDC30-209ENST00000477155 EIF4G1Q04637 1599 aaKnown RBP11.06□□□□□ -0.64
CCDC30-209ENST00000477155 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
CCDC30-209ENST00000477155 PEG3Q9GZU2 1588 aa11.04□□□□□ -0.64
CCDC30-209ENST00000477155 SMARCA2P51531 1590 aa11.04□□□□□ -0.64
CCDC30-209ENST00000477155 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
CCDC30-209ENST00000477155 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
CCDC30-209ENST00000477155 NCAPD3P42695 1498 aa10.96□□□□□ -0.66
CCDC30-209ENST00000477155 EHMT2Q96KQ7 1210 aa10.91□□□□□ -0.66
CCDC30-209ENST00000477155 ABCC8Q09428 1581 aa10.91□□□□□ -0.66
CCDC30-209ENST00000477155 CC2D2AQ9P2K1 1620 aa10.9□□□□□ -0.66
CCDC30-209ENST00000477155 HMGXB3Q12766 1538 aa10.89□□□□□ -0.67
CCDC30-209ENST00000477155 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
CCDC30-209ENST00000477155 WRNQ14191 1432 aaPredicted RBP eCLIP10.8□□□□□ -0.68
CCDC30-209ENST00000477155 CFTRP13569 1480 aa10.75□□□□□ -0.69
CCDC30-209ENST00000477155 SOGA1O94964 1423 aa10.74□□□□□ -0.69
CCDC30-209ENST00000477155 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
CCDC30-209ENST00000477155 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
CCDC30-209ENST00000477155 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.7
CCDC30-209ENST00000477155 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
CCDC30-209ENST00000477155 NESP48681 1621 aa10.67□□□□□ -0.7
CCDC30-209ENST00000477155 CUX1P39880 1505 aa10.63□□□□□ -0.71
CCDC30-209ENST00000477155 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
CCDC30-209ENST00000477155 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
CCDC30-209ENST00000477155 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
CCDC30-209ENST00000477155 EEA1Q15075 1411 aa10.6□□□□□ -0.71
CCDC30-209ENST00000477155 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
CCDC30-209ENST00000477155 PRDM2Q13029 1718 aa10.57□□□□□ -0.72
CCDC30-209ENST00000477155 RANGAP1P46060 587 aaPredicted RBP10.55□□□□□ -0.72
CCDC30-209ENST00000477155 LAMC3Q9Y6N6 1575 aa10.54□□□□□ -0.72
CCDC30-209ENST00000477155 PCGF6Q9BYE7 350 aa10.53□□□□□ -0.72
CCDC30-209ENST00000477155 PDS5BQ9NTI5 1447 aa10.53□□□□□ -0.72
CCDC30-209ENST00000477155 FGD5Q6ZNL6 1462 aa10.52□□□□□ -0.72
CCDC30-209ENST00000477155 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.73
CCDC30-209ENST00000477155 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
CCDC30-209ENST00000477155 KIF27Q86VH2 1401 aa10.51□□□□□ -0.73
CCDC30-209ENST00000477155 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
CCDC30-209ENST00000477155 TNIKQ9UKE5 1360 aa10.5□□□□□ -0.73
CCDC30-209ENST00000477155 CUX2O14529 1486 aa10.5□□□□□ -0.73
CCDC30-209ENST00000477155 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
CCDC30-209ENST00000477155 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
CCDC30-209ENST00000477155 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
CCDC30-209ENST00000477155 CEP162Q5TB80 1403 aa10.48□□□□□ -0.73
CCDC30-209ENST00000477155 URB2Q14146 1524 aaKnown RBP10.47□□□□□ -0.73
CCDC30-209ENST00000477155 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.73
CCDC30-209ENST00000477155 POLA1P09884 1462 aaPredicted RBP10.45□□□□□ -0.74
CCDC30-209ENST00000477155 KIF21AQ7Z4S6 1674 aa10.45□□□□□ -0.74
CCDC30-209ENST00000477155 IGF1RP08069 1367 aa10.44□□□□□ -0.74
CCDC30-209ENST00000477155 KIF21BO75037 1637 aa10.44□□□□□ -0.74
CCDC30-209ENST00000477155 TTBK1Q5TCY1 1321 aaPredicted RBP10.44□□□□□ -0.74
CCDC30-209ENST00000477155 PRXQ9BXM0 1461 aa10.42□□□□□ -0.74
CCDC30-209ENST00000477155 TRIM26Q12899 539 aaPredicted RBP10.42□□□□□ -0.74
CCDC30-209ENST00000477155 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
CCDC30-209ENST00000477155 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
CCDC30-209ENST00000477155 CLIP1P30622 1438 aa10.39□□□□□ -0.75
CCDC30-209ENST00000477155 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
CCDC30-209ENST00000477155 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
CCDC30-209ENST00000477155 ERICH3Q5RHP9 1530 aa10.36□□□□□ -0.75
CCDC30-209ENST00000477155 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
CCDC30-209ENST00000477155 GAPVD1Q14C86 1478 aa10.32□□□□□ -0.76
CCDC30-209ENST00000477155 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC30-209ENST00000477155 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
CCDC30-209ENST00000477155 APLP2Q06481 763 aa10.3□□□□□ -0.76
CCDC30-209ENST00000477155 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
CCDC30-209ENST00000477155 VPS8Q8N3P4 1428 aa10.27□□□□□ -0.77
CCDC30-209ENST00000477155 WDR97A6NE52 1622 aa10.27□□□□□ -0.77
CCDC30-209ENST00000477155 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.77
CCDC30-209ENST00000477155 WDR62O43379 1518 aa10.26□□□□□ -0.77
CCDC30-209ENST00000477155 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
CCDC30-209ENST00000477155 ARAP1Q96P48 1450 aa10.25□□□□□ -0.77
CCDC30-209ENST00000477155 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
CCDC30-209ENST00000477155 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
CCDC30-209ENST00000477155 ATP1B4Q9UN42 357 aaPredicted RBP10.23□□□□□ -0.77
CCDC30-209ENST00000477155 CUL7Q14999 1698 aa10.23□□□□□ -0.77
CCDC30-209ENST00000477155 THOC2Q8NI27 1593 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms