RNA–Protein interactions for RNA: ENST00000477068.1

SP110-209, Transcript of SP110 nuclear body protein, humanhuman

TSL 2

Gene SP110, Length 2,725 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-209ENST00000477068 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
SP110-209ENST00000477068 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.01
SP110-209ENST00000477068 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
SP110-209ENST00000477068 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
SP110-209ENST00000477068 ZCCHC6Q5VYS8 1495 aaKnown RBP13.69□□□□□ -0.22
SP110-209ENST00000477068 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
SP110-209ENST00000477068 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
SP110-209ENST00000477068 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
SP110-209ENST00000477068 NACADO15069 1562 aa13.31□□□□□ -0.28
SP110-209ENST00000477068 ABCC9O60706 1549 aa13.18□□□□□ -0.3
SP110-209ENST00000477068 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
SP110-209ENST00000477068 UNC13AQ9UPW8 1703 aa12.88□□□□□ -0.35
SP110-209ENST00000477068 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
SP110-209ENST00000477068 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
SP110-209ENST00000477068 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
SP110-209ENST00000477068 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
SP110-209ENST00000477068 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
SP110-209ENST00000477068 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
SP110-209ENST00000477068 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
SP110-209ENST00000477068 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
SP110-209ENST00000477068 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
SP110-209ENST00000477068 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
SP110-209ENST00000477068 SENP3Q9H4L4 574 aaPredicted RBP12.43□□□□□ -0.42
SP110-209ENST00000477068 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
SP110-209ENST00000477068 TOP2AP11388 1531 aaKnown RBP12.35□□□□□ -0.43
SP110-209ENST00000477068 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
SP110-209ENST00000477068 WIZO95785 1651 aa12.32□□□□□ -0.44
SP110-209ENST00000477068 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
SP110-209ENST00000477068 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
SP110-209ENST00000477068 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
SP110-209ENST00000477068 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
SP110-209ENST00000477068 NCAPD3P42695 1498 aa12.23□□□□□ -0.45
SP110-209ENST00000477068 SUPT5HO00267 1087 aaKnown RBP12.17□□□□□ -0.46
SP110-209ENST00000477068 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
SP110-209ENST00000477068 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
SP110-209ENST00000477068 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
SP110-209ENST00000477068 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
SP110-209ENST00000477068 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
SP110-209ENST00000477068 CFTRP13569 1480 aa11.92□□□□□ -0.5
SP110-209ENST00000477068 LAMC3Q9Y6N6 1575 aa11.86□□□□□ -0.51
SP110-209ENST00000477068 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
SP110-209ENST00000477068 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
SP110-209ENST00000477068 ADRA2BP18089 450 aa11.78□□□□□ -0.52
SP110-209ENST00000477068 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
SP110-209ENST00000477068 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
SP110-209ENST00000477068 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
SP110-209ENST00000477068 ABCC8Q09428 1581 aa11.71□□□□□ -0.54
SP110-209ENST00000477068 EEA1Q15075 1411 aa11.7□□□□□ -0.54
SP110-209ENST00000477068 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
SP110-209ENST00000477068 CUX1P39880 1505 aa11.67□□□□□ -0.54
SP110-209ENST00000477068 PPP6R1Q9UPN7 881 aa11.66□□□□□ -0.54
SP110-209ENST00000477068 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
SP110-209ENST00000477068 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
SP110-209ENST00000477068 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
SP110-209ENST00000477068 FOXD1Q16676 465 aa11.61□□□□□ -0.55
SP110-209ENST00000477068 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
SP110-209ENST00000477068 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
SP110-209ENST00000477068 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
SP110-209ENST00000477068 NESP48681 1621 aa11.58□□□□□ -0.56
SP110-209ENST00000477068 KIF21BO75037 1637 aa11.56□□□□□ -0.56
SP110-209ENST00000477068 TOPBP1Q92547 1522 aa11.56□□□□□ -0.56
SP110-209ENST00000477068 WDR62O43379 1518 aa11.56□□□□□ -0.56
SP110-209ENST00000477068 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
SP110-209ENST00000477068 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
SP110-209ENST00000477068 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
SP110-209ENST00000477068 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.56
SP110-209ENST00000477068 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
SP110-209ENST00000477068 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
SP110-209ENST00000477068 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
SP110-209ENST00000477068 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
SP110-209ENST00000477068 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
SP110-209ENST00000477068 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
SP110-209ENST00000477068 KIF27Q86VH2 1401 aa11.45□□□□□ -0.58
SP110-209ENST00000477068 SOGA1O94964 1423 aa11.45□□□□□ -0.58
SP110-209ENST00000477068 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
SP110-209ENST00000477068 CUL7Q14999 1698 aa11.45□□□□□ -0.58
SP110-209ENST00000477068 KCNA4P22459 653 aa11.44□□□□□ -0.58
SP110-209ENST00000477068 PRXQ9BXM0 1461 aa11.44□□□□□ -0.58
SP110-209ENST00000477068 GOLGA3Q08378 1498 aa11.42□□□□□ -0.58
SP110-209ENST00000477068 IFT140Q96RY7 1462 aa11.4□□□□□ -0.58
SP110-209ENST00000477068 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.59
SP110-209ENST00000477068 CUX2O14529 1486 aa11.38□□□□□ -0.59
SP110-209ENST00000477068 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
SP110-209ENST00000477068 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
SP110-209ENST00000477068 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
SP110-209ENST00000477068 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
SP110-209ENST00000477068 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
SP110-209ENST00000477068 HRCP23327 699 aa11.33□□□□□ -0.6
SP110-209ENST00000477068 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
SP110-209ENST00000477068 IGF1RP08069 1367 aa11.31□□□□□ -0.6
SP110-209ENST00000477068 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
SP110-209ENST00000477068 RAPGEF2Q9Y4G8 1499 aa11.3□□□□□ -0.6
SP110-209ENST00000477068 GAPVD1Q14C86 1478 aa11.29□□□□□ -0.6
SP110-209ENST00000477068 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
SP110-209ENST00000477068 CTTNBP2Q8WZ74 1663 aa11.28□□□□□ -0.6
SP110-209ENST00000477068 GRIN2BQ13224 1484 aa11.27□□□□□ -0.61
SP110-209ENST00000477068 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
SP110-209ENST00000477068 CARMIL1Q5VZK9 1371 aa11.23□□□□□ -0.61
SP110-209ENST00000477068 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
SP110-209ENST00000477068 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms