RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 NISCHQ9Y2I1 1504 aa45.74■■■■■ 4.91
CLK2-205ENST00000476983 CCDC180Q9P1Z9 1646 aa40.07■■■■■ 4
CLK2-205ENST00000476983 ZCCHC6Q5VYS8 1495 aaKnown RBP38.36■■■■□ 3.73
CLK2-205ENST00000476983 ABCC9O60706 1549 aa38.27■■■■□ 3.72
CLK2-205ENST00000476983 DCAF8L2P0C7V8 631 aa37.96■■■■□ 3.67
CLK2-205ENST00000476983 DCAF1Q9Y4B6 1507 aa37.76■■■■□ 3.64
CLK2-205ENST00000476983 MYO15BQ96JP2 1530 aa37.43■■■■□ 3.58
CLK2-205ENST00000476983 NACADO15069 1562 aa37.37■■■■□ 3.57
CLK2-205ENST00000476983 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
CLK2-205ENST00000476983 SHROOM4Q9ULL8 1493 aa37.17■■■■□ 3.54
CLK2-205ENST00000476983 SCRIBQ14160 1630 aa36.88■■■■□ 3.49
CLK2-205ENST00000476983 UNC13AQ9UPW8 1703 aa36.49■■■■□ 3.43
CLK2-205ENST00000476983 BICRAQ9NZM4 1560 aa36.07■■■■□ 3.37
CLK2-205ENST00000476983 PABPN1Q86U42 306 aaKnown RBP eCLIP36.01■■■■□ 3.362e-6■□□□□ 11.1
CLK2-205ENST00000476983 CECR2Q9BXF3 1484 aa35.61■■■■□ 3.29
CLK2-205ENST00000476983 SUPT5HO00267 1087 aaKnown RBP35.54■■■■□ 3.28
CLK2-205ENST00000476983 MROH2BQ7Z745 1585 aa35.36■■■■□ 3.25
CLK2-205ENST00000476983 BAZ1AQ9NRL2 1556 aaPredicted RBP35.35■■■■□ 3.25
CLK2-205ENST00000476983 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
CLK2-205ENST00000476983 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
CLK2-205ENST00000476983 WIZO95785 1651 aa35.09■■■■□ 3.21
CLK2-205ENST00000476983 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
CLK2-205ENST00000476983 PEG3Q9GZU2 1588 aa34.8■■■■□ 3.16
CLK2-205ENST00000476983 ATAD2BQ9ULI0 1458 aa34.75■■■■□ 3.15
CLK2-205ENST00000476983 SMARCA2P51531 1590 aa34.72■■■■□ 3.15
CLK2-205ENST00000476983 TOP2AP11388 1531 aaKnown RBP34.67■■■■□ 3.14
CLK2-205ENST00000476983 CC2D2AQ9P2K1 1620 aa34.61■■■■□ 3.13
CLK2-205ENST00000476983 BAZ1BQ9UIG0 1483 aaKnown RBP34.56■■■■□ 3.12
CLK2-205ENST00000476983 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
CLK2-205ENST00000476983 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
CLK2-205ENST00000476983 CCDC88BA6NC98 1476 aa34.3■■■■□ 3.08
CLK2-205ENST00000476983 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
CLK2-205ENST00000476983 CHIC1Q5VXU3 224 aa33.78■■■■□ 3
CLK2-205ENST00000476983 CFTRP13569 1480 aa33.63■■■□□ 2.97
CLK2-205ENST00000476983 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
CLK2-205ENST00000476983 ABCC8Q09428 1581 aa33.53■■■□□ 2.96
CLK2-205ENST00000476983 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
CLK2-205ENST00000476983 NESP48681 1621 aa33.5■■■□□ 2.95
CLK2-205ENST00000476983 LAMC3Q9Y6N6 1575 aa33.4■■■□□ 2.94
CLK2-205ENST00000476983 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
CLK2-205ENST00000476983 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
CLK2-205ENST00000476983 FANCD2Q9BXW9 1451 aa33.25■■■□□ 2.91
CLK2-205ENST00000476983 SYNJ1O43426 1573 aa33.22■■■□□ 2.91
CLK2-205ENST00000476983 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
CLK2-205ENST00000476983 KIF21AQ7Z4S6 1674 aa33.11■■■□□ 2.89
CLK2-205ENST00000476983 CUX1P39880 1505 aa33.09■■■□□ 2.89
CLK2-205ENST00000476983 CEP164Q9UPV0 1460 aa33.08■■■□□ 2.89
CLK2-205ENST00000476983 TOP2BQ02880 1626 aa33.07■■■□□ 2.89
CLK2-205ENST00000476983 BIVM-ERCC5R4GMW8 1640 aa33.06■■■□□ 2.88
CLK2-205ENST00000476983 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
CLK2-205ENST00000476983 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
CLK2-205ENST00000476983 TOPBP1Q92547 1522 aa32.86■■■□□ 2.85
CLK2-205ENST00000476983 FAM9AQ8IZU1 332 aaPredicted RBP32.85■■■□□ 2.85
CLK2-205ENST00000476983 ERCC6Q03468 1493 aa32.84■■■□□ 2.85
CLK2-205ENST00000476983 FGD5Q6ZNL6 1462 aa32.79■■■□□ 2.84
CLK2-205ENST00000476983 SOGA1O94964 1423 aa32.78■■■□□ 2.84
CLK2-205ENST00000476983 MRC2Q9UBG0 1479 aa32.77■■■□□ 2.84
CLK2-205ENST00000476983 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
CLK2-205ENST00000476983 POLA1P09884 1462 aaPredicted RBP32.67■■■□□ 2.82
CLK2-205ENST00000476983 THOC2Q8NI27 1593 aaKnown RBP32.63■■■□□ 2.81
CLK2-205ENST00000476983 WDR62O43379 1518 aa32.6■■■□□ 2.81
CLK2-205ENST00000476983 RAD54L2Q9Y4B4 1467 aa32.59■■■□□ 2.81
CLK2-205ENST00000476983 EEA1Q15075 1411 aa32.56■■■□□ 2.8
CLK2-205ENST00000476983 CUX2O14529 1486 aa32.51■■■□□ 2.79
CLK2-205ENST00000476983 LOC105371045A0A1W2PR82 267 aa32.5■■■□□ 2.79
CLK2-205ENST00000476983 EHMT2Q96KQ7 1210 aa32.46■■■□□ 2.79
CLK2-205ENST00000476983 KIF27Q86VH2 1401 aa32.46■■■□□ 2.79
CLK2-205ENST00000476983 CSRNP3Q8WYN3 585 aa32.45■■■□□ 2.79
CLK2-205ENST00000476983 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
CLK2-205ENST00000476983 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
CLK2-205ENST00000476983 TARBP1Q13395 1621 aaKnown RBP32.4■■■□□ 2.78
CLK2-205ENST00000476983 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
CLK2-205ENST00000476983 TDRD9Q8NDG6 1382 aaKnown RBP32.28■■■□□ 2.76
CLK2-205ENST00000476983 ABCA5Q8WWZ7 1642 aa32.25■■■□□ 2.75
CLK2-205ENST00000476983 KIF21BO75037 1637 aa32.23■■■□□ 2.75
CLK2-205ENST00000476983 IGF1RP08069 1367 aa32.2■■■□□ 2.74
CLK2-205ENST00000476983 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
CLK2-205ENST00000476983 ZNF608Q9ULD9 1512 aaPredicted RBP32.18■■■□□ 2.74
CLK2-205ENST00000476983 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
CLK2-205ENST00000476983 AQRO60306 1485 aaKnown RBP eCLIP32.15■■■□□ 2.745e-7■■■■■ 28
CLK2-205ENST00000476983 PRXQ9BXM0 1461 aa32.15■■■□□ 2.74
CLK2-205ENST00000476983 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
CLK2-205ENST00000476983 PBRM1Q86U86 1689 aa32.1■■■□□ 2.73
CLK2-205ENST00000476983 EIF4G3O43432 1585 aaKnown RBP32.08■■■□□ 2.73
CLK2-205ENST00000476983 ERICH3Q5RHP9 1530 aa32.06■■■□□ 2.72
CLK2-205ENST00000476983 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
CLK2-205ENST00000476983 UBTFP17480 764 aaKnown RBP32.05■■■□□ 2.72
CLK2-205ENST00000476983 CUL7Q14999 1698 aa32.03■■■□□ 2.72
CLK2-205ENST00000476983 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
CLK2-205ENST00000476983 TNIKQ9UKE5 1360 aa31.95■■■□□ 2.71
CLK2-205ENST00000476983 ADAMTS12P58397 1594 aa31.87■■■□□ 2.69
CLK2-205ENST00000476983 SNAPC4Q5SXM2 1469 aa31.86■■■□□ 2.69
CLK2-205ENST00000476983 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
CLK2-205ENST00000476983 CEP162Q5TB80 1403 aa31.8■■■□□ 2.68
CLK2-205ENST00000476983 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
CLK2-205ENST00000476983 RANGAP1P46060 587 aaPredicted RBP31.73■■■□□ 2.67
CLK2-205ENST00000476983 CTTNBP2Q8WZ74 1663 aa31.67■■■□□ 2.66
CLK2-205ENST00000476983 CLIP1P30622 1438 aa31.64■■■□□ 2.66
CLK2-205ENST00000476983 SYNJ2O15056 1496 aa31.64■■■□□ 2.65
CLK2-205ENST00000476983 GRIN2AQ12879 1464 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms