RNA–Protein interactions for RNA: ENST00000476680.1

TNC-206, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-206ENST00000476680 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
TNC-206ENST00000476680 ABCC9O60706 1549 aa18.03■□□□□ 0.48
TNC-206ENST00000476680 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
TNC-206ENST00000476680 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
TNC-206ENST00000476680 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
TNC-206ENST00000476680 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
TNC-206ENST00000476680 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
TNC-206ENST00000476680 NACADO15069 1562 aa16.65■□□□□ 0.26
TNC-206ENST00000476680 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
TNC-206ENST00000476680 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
TNC-206ENST00000476680 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
TNC-206ENST00000476680 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
TNC-206ENST00000476680 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
TNC-206ENST00000476680 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
TNC-206ENST00000476680 SHROOM4Q9ULL8 1493 aa16.07■□□□□ 0.16
TNC-206ENST00000476680 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
TNC-206ENST00000476680 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
TNC-206ENST00000476680 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
TNC-206ENST00000476680 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
TNC-206ENST00000476680 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
TNC-206ENST00000476680 CUX2O14529 1486 aa15.6■□□□□ 0.09
TNC-206ENST00000476680 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
TNC-206ENST00000476680 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
TNC-206ENST00000476680 NESP48681 1621 aa15.35■□□□□ 0.05
TNC-206ENST00000476680 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
TNC-206ENST00000476680 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
TNC-206ENST00000476680 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
TNC-206ENST00000476680 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
TNC-206ENST00000476680 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
TNC-206ENST00000476680 THOC2Q8NI27 1593 aaKnown RBP15.16■□□□□ 0.02
TNC-206ENST00000476680 PDS5BQ9NTI5 1447 aa15.11■□□□□ 0.01
TNC-206ENST00000476680 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
TNC-206ENST00000476680 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
TNC-206ENST00000476680 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
TNC-206ENST00000476680 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
TNC-206ENST00000476680 CADPSQ9ULU8 1353 aa14.97□□□□□ -0.01
TNC-206ENST00000476680 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
TNC-206ENST00000476680 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
TNC-206ENST00000476680 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
TNC-206ENST00000476680 WDR62O43379 1518 aa14.89□□□□□ -0.03
TNC-206ENST00000476680 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
TNC-206ENST00000476680 FANCD2Q9BXW9 1451 aa14.81□□□□□ -0.04
TNC-206ENST00000476680 WIZO95785 1651 aa14.73□□□□□ -0.05
TNC-206ENST00000476680 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
TNC-206ENST00000476680 RIMBP3CA6NJZ7 1639 aa14.68□□□□□ -0.06
TNC-206ENST00000476680 RIMBP3BA6NNM3 1639 aa14.68□□□□□ -0.06
TNC-206ENST00000476680 RIMBP3Q9UFD9 1639 aa14.68□□□□□ -0.06
TNC-206ENST00000476680 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
TNC-206ENST00000476680 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
TNC-206ENST00000476680 CFTRP13569 1480 aa14.67□□□□□ -0.06
TNC-206ENST00000476680 ARHGEF11O15085 1522 aa14.62□□□□□ -0.07
TNC-206ENST00000476680 ZNF608Q9ULD9 1512 aaPredicted RBP14.59□□□□□ -0.07
TNC-206ENST00000476680 FBLN2P98095 1184 aa14.56□□□□□ -0.08
TNC-206ENST00000476680 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
TNC-206ENST00000476680 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
TNC-206ENST00000476680 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
TNC-206ENST00000476680 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
TNC-206ENST00000476680 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
TNC-206ENST00000476680 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
TNC-206ENST00000476680 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.1
TNC-206ENST00000476680 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
TNC-206ENST00000476680 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
TNC-206ENST00000476680 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
TNC-206ENST00000476680 CHD1O14646 1710 aa14.37□□□□□ -0.11
TNC-206ENST00000476680 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
TNC-206ENST00000476680 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
TNC-206ENST00000476680 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
TNC-206ENST00000476680 CHMP7Q8WUX9 453 aaPredicted RBP14.32□□□□□ -0.12
TNC-206ENST00000476680 POLA1P09884 1462 aaPredicted RBP14.29□□□□□ -0.12
TNC-206ENST00000476680 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
TNC-206ENST00000476680 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
TNC-206ENST00000476680 SOGA1O94964 1423 aa14.27□□□□□ -0.12
TNC-206ENST00000476680 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
TNC-206ENST00000476680 SYNJ1O43426 1573 aa14.21□□□□□ -0.14
TNC-206ENST00000476680 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
TNC-206ENST00000476680 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
TNC-206ENST00000476680 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
TNC-206ENST00000476680 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
TNC-206ENST00000476680 GRIN2BQ13224 1484 aa14.15□□□□□ -0.14
TNC-206ENST00000476680 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
TNC-206ENST00000476680 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
TNC-206ENST00000476680 CUX1P39880 1505 aa14.06□□□□□ -0.16
TNC-206ENST00000476680 ERCC6L2Q5T890 1561 aa14□□□□□ -0.17
TNC-206ENST00000476680 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
TNC-206ENST00000476680 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
TNC-206ENST00000476680 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
TNC-206ENST00000476680 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
TNC-206ENST00000476680 CEP170Q5SW79 1584 aa13.93□□□□□ -0.18
TNC-206ENST00000476680 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNC-206ENST00000476680 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
TNC-206ENST00000476680 NUP160Q12769 1436 aa13.9□□□□□ -0.19
TNC-206ENST00000476680 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
TNC-206ENST00000476680 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
TNC-206ENST00000476680 ILDR1Q86SU0 546 aaPredicted RBP13.87□□□□□ -0.19
TNC-206ENST00000476680 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
TNC-206ENST00000476680 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
TNC-206ENST00000476680 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
TNC-206ENST00000476680 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
TNC-206ENST00000476680 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
TNC-206ENST00000476680 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms