RNA–Protein interactions for RNA: ENST00000476197.1

FNDC4-202, Transcript of fibronectin type III domain containing 4, humanhuman

TSL 2

Gene FNDC4, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC4-202ENST00000476197 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
FNDC4-202ENST00000476197 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
FNDC4-202ENST00000476197 ABCC9O60706 1549 aa28.04■■■□□ 2.08
FNDC4-202ENST00000476197 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
FNDC4-202ENST00000476197 NACADO15069 1562 aa27.26■■□□□ 1.95
FNDC4-202ENST00000476197 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
FNDC4-202ENST00000476197 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
FNDC4-202ENST00000476197 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
FNDC4-202ENST00000476197 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
FNDC4-202ENST00000476197 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
FNDC4-202ENST00000476197 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
FNDC4-202ENST00000476197 BICRAQ9NZM4 1560 aa26.33■■□□□ 1.8
FNDC4-202ENST00000476197 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
FNDC4-202ENST00000476197 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
FNDC4-202ENST00000476197 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
FNDC4-202ENST00000476197 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
FNDC4-202ENST00000476197 BAZ1AQ9NRL2 1556 aaPredicted RBP25.42■■□□□ 1.66
FNDC4-202ENST00000476197 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
FNDC4-202ENST00000476197 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
FNDC4-202ENST00000476197 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
FNDC4-202ENST00000476197 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
FNDC4-202ENST00000476197 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
FNDC4-202ENST00000476197 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
FNDC4-202ENST00000476197 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
FNDC4-202ENST00000476197 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
FNDC4-202ENST00000476197 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
FNDC4-202ENST00000476197 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
FNDC4-202ENST00000476197 WIZO95785 1651 aa24.99■■□□□ 1.59
FNDC4-202ENST00000476197 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
FNDC4-202ENST00000476197 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
FNDC4-202ENST00000476197 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
FNDC4-202ENST00000476197 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
FNDC4-202ENST00000476197 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
FNDC4-202ENST00000476197 NESP48681 1621 aa24.34■■□□□ 1.49
FNDC4-202ENST00000476197 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
FNDC4-202ENST00000476197 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
FNDC4-202ENST00000476197 CFTRP13569 1480 aa24.27■■□□□ 1.48
FNDC4-202ENST00000476197 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
FNDC4-202ENST00000476197 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
FNDC4-202ENST00000476197 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
FNDC4-202ENST00000476197 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
FNDC4-202ENST00000476197 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
FNDC4-202ENST00000476197 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
FNDC4-202ENST00000476197 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
FNDC4-202ENST00000476197 WDR62O43379 1518 aa23.9■■□□□ 1.42
FNDC4-202ENST00000476197 CUX2O14529 1486 aa23.89■■□□□ 1.42
FNDC4-202ENST00000476197 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
FNDC4-202ENST00000476197 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
FNDC4-202ENST00000476197 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
FNDC4-202ENST00000476197 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
FNDC4-202ENST00000476197 CUX1P39880 1505 aa23.65■■□□□ 1.38
FNDC4-202ENST00000476197 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
FNDC4-202ENST00000476197 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
FNDC4-202ENST00000476197 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
FNDC4-202ENST00000476197 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
FNDC4-202ENST00000476197 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
FNDC4-202ENST00000476197 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
FNDC4-202ENST00000476197 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
FNDC4-202ENST00000476197 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
FNDC4-202ENST00000476197 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
FNDC4-202ENST00000476197 SOGA1O94964 1423 aa23.42■■□□□ 1.34
FNDC4-202ENST00000476197 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
FNDC4-202ENST00000476197 EIF4G3O43432 1585 aaKnown RBP23.38■■□□□ 1.33
FNDC4-202ENST00000476197 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.33
FNDC4-202ENST00000476197 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.32
FNDC4-202ENST00000476197 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
FNDC4-202ENST00000476197 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
FNDC4-202ENST00000476197 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.314e-8■■■■■ 31.9
FNDC4-202ENST00000476197 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
FNDC4-202ENST00000476197 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
FNDC4-202ENST00000476197 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
FNDC4-202ENST00000476197 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
FNDC4-202ENST00000476197 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
FNDC4-202ENST00000476197 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
FNDC4-202ENST00000476197 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
FNDC4-202ENST00000476197 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
FNDC4-202ENST00000476197 CHD1O14646 1710 aa23.05■■□□□ 1.28
FNDC4-202ENST00000476197 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
FNDC4-202ENST00000476197 CUL7Q14999 1698 aa23.01■■□□□ 1.27
FNDC4-202ENST00000476197 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
FNDC4-202ENST00000476197 SYNJ2O15056 1496 aa22.99■■□□□ 1.27
FNDC4-202ENST00000476197 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
FNDC4-202ENST00000476197 EEA1Q15075 1411 aa22.9■■□□□ 1.26
FNDC4-202ENST00000476197 IGF1RP08069 1367 aa22.88■■□□□ 1.25
FNDC4-202ENST00000476197 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
FNDC4-202ENST00000476197 GRIN2AQ12879 1464 aa22.87■■□□□ 1.25
FNDC4-202ENST00000476197 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
FNDC4-202ENST00000476197 FBLN2P98095 1184 aa22.85■■□□□ 1.25
FNDC4-202ENST00000476197 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
FNDC4-202ENST00000476197 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
FNDC4-202ENST00000476197 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
FNDC4-202ENST00000476197 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
FNDC4-202ENST00000476197 NUP160Q12769 1436 aa22.74■■□□□ 1.23
FNDC4-202ENST00000476197 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
FNDC4-202ENST00000476197 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
FNDC4-202ENST00000476197 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
FNDC4-202ENST00000476197 DNAJC5Q9H3Z4 198 aa22.66■■□□□ 1.22
FNDC4-202ENST00000476197 KIF21BO75037 1637 aa22.66■■□□□ 1.22
FNDC4-202ENST00000476197 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
FNDC4-202ENST00000476197 FAM9AQ8IZU1 332 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms