RNA–Protein interactions for RNA: ENST00000476039.1

LAMB1-211, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-211ENST00000476039 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
LAMB1-211ENST00000476039 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
LAMB1-211ENST00000476039 ABCC9O60706 1549 aa24.57■■□□□ 1.52
LAMB1-211ENST00000476039 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
LAMB1-211ENST00000476039 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
LAMB1-211ENST00000476039 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
LAMB1-211ENST00000476039 NACADO15069 1562 aa23.84■■□□□ 1.41
LAMB1-211ENST00000476039 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
LAMB1-211ENST00000476039 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
LAMB1-211ENST00000476039 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
LAMB1-211ENST00000476039 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
LAMB1-211ENST00000476039 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
LAMB1-211ENST00000476039 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
LAMB1-211ENST00000476039 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
LAMB1-211ENST00000476039 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
LAMB1-211ENST00000476039 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
LAMB1-211ENST00000476039 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
LAMB1-211ENST00000476039 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
LAMB1-211ENST00000476039 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
LAMB1-211ENST00000476039 MROH2BQ7Z745 1585 aa22.31■■□□□ 1.16
LAMB1-211ENST00000476039 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
LAMB1-211ENST00000476039 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
LAMB1-211ENST00000476039 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
LAMB1-211ENST00000476039 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
LAMB1-211ENST00000476039 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
LAMB1-211ENST00000476039 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
LAMB1-211ENST00000476039 WIZO95785 1651 aa22.06■■□□□ 1.12
LAMB1-211ENST00000476039 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
LAMB1-211ENST00000476039 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
LAMB1-211ENST00000476039 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
LAMB1-211ENST00000476039 BAZ1BQ9UIG0 1483 aaKnown RBP21.91■■□□□ 1.1
LAMB1-211ENST00000476039 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
LAMB1-211ENST00000476039 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
LAMB1-211ENST00000476039 CFTRP13569 1480 aa21.39■■□□□ 1.02
LAMB1-211ENST00000476039 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
LAMB1-211ENST00000476039 CUX2O14529 1486 aa21.3■■□□□ 1
LAMB1-211ENST00000476039 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
LAMB1-211ENST00000476039 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
LAMB1-211ENST00000476039 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
LAMB1-211ENST00000476039 NESP48681 1621 aa21.14■□□□□ 0.97
LAMB1-211ENST00000476039 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
LAMB1-211ENST00000476039 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
LAMB1-211ENST00000476039 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
LAMB1-211ENST00000476039 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
LAMB1-211ENST00000476039 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
LAMB1-211ENST00000476039 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.95
LAMB1-211ENST00000476039 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
LAMB1-211ENST00000476039 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
LAMB1-211ENST00000476039 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
LAMB1-211ENST00000476039 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
LAMB1-211ENST00000476039 CUX1P39880 1505 aa20.91■□□□□ 0.94
LAMB1-211ENST00000476039 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
LAMB1-211ENST00000476039 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
LAMB1-211ENST00000476039 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
LAMB1-211ENST00000476039 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
LAMB1-211ENST00000476039 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
LAMB1-211ENST00000476039 TOPBP1Q92547 1522 aa20.83■□□□□ 0.92
LAMB1-211ENST00000476039 WDR62O43379 1518 aa20.78■□□□□ 0.92
LAMB1-211ENST00000476039 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
LAMB1-211ENST00000476039 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
LAMB1-211ENST00000476039 EEA1Q15075 1411 aa20.67■□□□□ 0.9
LAMB1-211ENST00000476039 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
LAMB1-211ENST00000476039 SOGA1O94964 1423 aa20.6■□□□□ 0.89
LAMB1-211ENST00000476039 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
LAMB1-211ENST00000476039 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
LAMB1-211ENST00000476039 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
LAMB1-211ENST00000476039 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
LAMB1-211ENST00000476039 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
LAMB1-211ENST00000476039 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
LAMB1-211ENST00000476039 RUSC2Q8N2Y8 1516 aa20.46■□□□□ 0.87
LAMB1-211ENST00000476039 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
LAMB1-211ENST00000476039 ERICH3Q5RHP9 1530 aa20.39■□□□□ 0.85
LAMB1-211ENST00000476039 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
LAMB1-211ENST00000476039 IGF1RP08069 1367 aa20.35■□□□□ 0.85
LAMB1-211ENST00000476039 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
LAMB1-211ENST00000476039 KIF21BO75037 1637 aa20.35■□□□□ 0.85
LAMB1-211ENST00000476039 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
LAMB1-211ENST00000476039 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
LAMB1-211ENST00000476039 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
LAMB1-211ENST00000476039 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
LAMB1-211ENST00000476039 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
LAMB1-211ENST00000476039 CUL7Q14999 1698 aa20.32■□□□□ 0.84
LAMB1-211ENST00000476039 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.84
LAMB1-211ENST00000476039 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
LAMB1-211ENST00000476039 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
LAMB1-211ENST00000476039 CARMIL1Q5VZK9 1371 aa20.24■□□□□ 0.83
LAMB1-211ENST00000476039 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
LAMB1-211ENST00000476039 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
LAMB1-211ENST00000476039 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
LAMB1-211ENST00000476039 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
LAMB1-211ENST00000476039 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
LAMB1-211ENST00000476039 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
LAMB1-211ENST00000476039 TNIKQ9UKE5 1360 aa20.14■□□□□ 0.81
LAMB1-211ENST00000476039 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
LAMB1-211ENST00000476039 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
LAMB1-211ENST00000476039 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
LAMB1-211ENST00000476039 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
LAMB1-211ENST00000476039 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
LAMB1-211ENST00000476039 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
LAMB1-211ENST00000476039 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms