RNA–Protein interactions for RNA: ENST00000476019.1

GBF1-202, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene GBF1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-202ENST00000476019 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
GBF1-202ENST00000476019 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
GBF1-202ENST00000476019 ABCC9O60706 1549 aa16.43■□□□□ 0.22
GBF1-202ENST00000476019 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
GBF1-202ENST00000476019 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
GBF1-202ENST00000476019 NACADO15069 1562 aa15.73■□□□□ 0.11
GBF1-202ENST00000476019 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
GBF1-202ENST00000476019 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
GBF1-202ENST00000476019 DCAF1Q9Y4B6 1507 aa15.65■□□□□ 0.1
GBF1-202ENST00000476019 UNC13AQ9UPW8 1703 aa15.59■□□□□ 0.09
GBF1-202ENST00000476019 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
GBF1-202ENST00000476019 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
GBF1-202ENST00000476019 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
GBF1-202ENST00000476019 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
GBF1-202ENST00000476019 SHROOM4Q9ULL8 1493 aa15.11■□□□□ 0.01
GBF1-202ENST00000476019 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
GBF1-202ENST00000476019 CECR2Q9BXF3 1484 aa14.9□□□□□ -0.02
GBF1-202ENST00000476019 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
GBF1-202ENST00000476019 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
GBF1-202ENST00000476019 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
GBF1-202ENST00000476019 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
GBF1-202ENST00000476019 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
GBF1-202ENST00000476019 WIZO95785 1651 aa14.58□□□□□ -0.07
GBF1-202ENST00000476019 PEG3Q9GZU2 1588 aa14.57□□□□□ -0.08
GBF1-202ENST00000476019 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
GBF1-202ENST00000476019 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
GBF1-202ENST00000476019 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
GBF1-202ENST00000476019 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
GBF1-202ENST00000476019 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
GBF1-202ENST00000476019 NESP48681 1621 aa14.33□□□□□ -0.12
GBF1-202ENST00000476019 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
GBF1-202ENST00000476019 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
GBF1-202ENST00000476019 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
GBF1-202ENST00000476019 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
GBF1-202ENST00000476019 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
GBF1-202ENST00000476019 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
GBF1-202ENST00000476019 CFTRP13569 1480 aa14.1□□□□□ -0.15
GBF1-202ENST00000476019 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
GBF1-202ENST00000476019 ERCC6Q03468 1493 aa14□□□□□ -0.17
GBF1-202ENST00000476019 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
GBF1-202ENST00000476019 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
GBF1-202ENST00000476019 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
GBF1-202ENST00000476019 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
GBF1-202ENST00000476019 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
GBF1-202ENST00000476019 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
GBF1-202ENST00000476019 WDR62O43379 1518 aa13.89□□□□□ -0.19
GBF1-202ENST00000476019 CUX2O14529 1486 aa13.84□□□□□ -0.19
GBF1-202ENST00000476019 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
GBF1-202ENST00000476019 CUX1P39880 1505 aa13.79□□□□□ -0.2
GBF1-202ENST00000476019 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
GBF1-202ENST00000476019 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
GBF1-202ENST00000476019 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
GBF1-202ENST00000476019 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
GBF1-202ENST00000476019 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
GBF1-202ENST00000476019 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
GBF1-202ENST00000476019 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
GBF1-202ENST00000476019 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
GBF1-202ENST00000476019 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
GBF1-202ENST00000476019 TOP2BQ02880 1626 aa13.63□□□□□ -0.23
GBF1-202ENST00000476019 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
GBF1-202ENST00000476019 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
GBF1-202ENST00000476019 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
GBF1-202ENST00000476019 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.232e-11■■■■□ 26
GBF1-202ENST00000476019 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.23
GBF1-202ENST00000476019 SOGA1O94964 1423 aa13.58□□□□□ -0.24
GBF1-202ENST00000476019 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
GBF1-202ENST00000476019 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
GBF1-202ENST00000476019 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
GBF1-202ENST00000476019 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
GBF1-202ENST00000476019 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
GBF1-202ENST00000476019 CHD1O14646 1710 aa13.43□□□□□ -0.26
GBF1-202ENST00000476019 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
GBF1-202ENST00000476019 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
GBF1-202ENST00000476019 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
GBF1-202ENST00000476019 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
GBF1-202ENST00000476019 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
GBF1-202ENST00000476019 CHIC1Q5VXU3 224 aa13.34□□□□□ -0.27
GBF1-202ENST00000476019 IGF1RP08069 1367 aa13.32□□□□□ -0.28
GBF1-202ENST00000476019 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
GBF1-202ENST00000476019 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
GBF1-202ENST00000476019 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
GBF1-202ENST00000476019 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
GBF1-202ENST00000476019 FBLN2P98095 1184 aa13.28□□□□□ -0.28
GBF1-202ENST00000476019 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
GBF1-202ENST00000476019 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
GBF1-202ENST00000476019 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
GBF1-202ENST00000476019 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
GBF1-202ENST00000476019 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
GBF1-202ENST00000476019 AEBP2Q6ZN18 517 aaPredicted RBP13.25□□□□□ -0.29
GBF1-202ENST00000476019 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
GBF1-202ENST00000476019 CHMP7Q8WUX9 453 aaPredicted RBP13.22□□□□□ -0.29
GBF1-202ENST00000476019 NUP160Q12769 1436 aa13.22□□□□□ -0.29
GBF1-202ENST00000476019 ERCC6L2Q5T890 1561 aa13.21□□□□□ -0.29
GBF1-202ENST00000476019 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
GBF1-202ENST00000476019 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
GBF1-202ENST00000476019 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
GBF1-202ENST00000476019 CUL7Q14999 1698 aa13.19□□□□□ -0.3
GBF1-202ENST00000476019 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
GBF1-202ENST00000476019 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
GBF1-202ENST00000476019 PRXQ9BXM0 1461 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms