RNA–Protein interactions for RNA: ENST00000475863.5

PCGF1-204, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 1,056 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-204ENST00000475863 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
PCGF1-204ENST00000475863 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
PCGF1-204ENST00000475863 ABCC9O60706 1549 aa28.2■■■□□ 2.1
PCGF1-204ENST00000475863 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
PCGF1-204ENST00000475863 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
PCGF1-204ENST00000475863 NACADO15069 1562 aa27.22■■□□□ 1.95
PCGF1-204ENST00000475863 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
PCGF1-204ENST00000475863 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
PCGF1-204ENST00000475863 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
PCGF1-204ENST00000475863 DCAF1Q9Y4B6 1507 aa27.11■■□□□ 1.93
PCGF1-204ENST00000475863 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
PCGF1-204ENST00000475863 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
PCGF1-204ENST00000475863 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
PCGF1-204ENST00000475863 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
PCGF1-204ENST00000475863 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
PCGF1-204ENST00000475863 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
PCGF1-204ENST00000475863 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
PCGF1-204ENST00000475863 CECR2Q9BXF3 1484 aa25.55■■□□□ 1.68
PCGF1-204ENST00000475863 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
PCGF1-204ENST00000475863 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
PCGF1-204ENST00000475863 BAZ1AQ9NRL2 1556 aaPredicted RBP25.34■■□□□ 1.65
PCGF1-204ENST00000475863 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
PCGF1-204ENST00000475863 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
PCGF1-204ENST00000475863 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
PCGF1-204ENST00000475863 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
PCGF1-204ENST00000475863 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
PCGF1-204ENST00000475863 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
PCGF1-204ENST00000475863 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
PCGF1-204ENST00000475863 WIZO95785 1651 aa24.98■■□□□ 1.59
PCGF1-204ENST00000475863 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
PCGF1-204ENST00000475863 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
PCGF1-204ENST00000475863 CUX2O14529 1486 aa24.71■■□□□ 1.55
PCGF1-204ENST00000475863 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
PCGF1-204ENST00000475863 NESP48681 1621 aa24.49■■□□□ 1.51
PCGF1-204ENST00000475863 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
PCGF1-204ENST00000475863 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
PCGF1-204ENST00000475863 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
PCGF1-204ENST00000475863 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
PCGF1-204ENST00000475863 CFTRP13569 1480 aa24.33■■□□□ 1.49
PCGF1-204ENST00000475863 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
PCGF1-204ENST00000475863 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
PCGF1-204ENST00000475863 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
PCGF1-204ENST00000475863 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
PCGF1-204ENST00000475863 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
PCGF1-204ENST00000475863 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
PCGF1-204ENST00000475863 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
PCGF1-204ENST00000475863 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
PCGF1-204ENST00000475863 WDR62O43379 1518 aa23.89■■□□□ 1.42
PCGF1-204ENST00000475863 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
PCGF1-204ENST00000475863 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
PCGF1-204ENST00000475863 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
PCGF1-204ENST00000475863 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
PCGF1-204ENST00000475863 CUX1P39880 1505 aa23.69■■□□□ 1.38
PCGF1-204ENST00000475863 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
PCGF1-204ENST00000475863 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
PCGF1-204ENST00000475863 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
PCGF1-204ENST00000475863 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
PCGF1-204ENST00000475863 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
PCGF1-204ENST00000475863 SOGA1O94964 1423 aa23.51■■□□□ 1.35
PCGF1-204ENST00000475863 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
PCGF1-204ENST00000475863 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
PCGF1-204ENST00000475863 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
PCGF1-204ENST00000475863 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
PCGF1-204ENST00000475863 ZNF608Q9ULD9 1512 aaPredicted RBP23.47■■□□□ 1.35
PCGF1-204ENST00000475863 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
PCGF1-204ENST00000475863 AQRO60306 1485 aaKnown RBP eCLIP23.38■■□□□ 1.331e-6■■■■□ 21.5
PCGF1-204ENST00000475863 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
PCGF1-204ENST00000475863 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
PCGF1-204ENST00000475863 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
PCGF1-204ENST00000475863 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
PCGF1-204ENST00000475863 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
PCGF1-204ENST00000475863 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
PCGF1-204ENST00000475863 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
PCGF1-204ENST00000475863 GRIN2BQ13224 1484 aa23.18■■□□□ 1.3
PCGF1-204ENST00000475863 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
PCGF1-204ENST00000475863 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
PCGF1-204ENST00000475863 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
PCGF1-204ENST00000475863 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
PCGF1-204ENST00000475863 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
PCGF1-204ENST00000475863 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
PCGF1-204ENST00000475863 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
PCGF1-204ENST00000475863 MAGI1Q96QZ7 1491 aaPredicted RBP23.08■■□□□ 1.29
PCGF1-204ENST00000475863 IGF1RP08069 1367 aa23.04■■□□□ 1.28
PCGF1-204ENST00000475863 ERICH3Q5RHP9 1530 aa23.04■■□□□ 1.28
PCGF1-204ENST00000475863 FBLN2P98095 1184 aa23.04■■□□□ 1.28
PCGF1-204ENST00000475863 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
PCGF1-204ENST00000475863 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
PCGF1-204ENST00000475863 SYNJ2O15056 1496 aa23■■□□□ 1.27
PCGF1-204ENST00000475863 ARHGEF11O15085 1522 aa22.99■■□□□ 1.27
PCGF1-204ENST00000475863 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
PCGF1-204ENST00000475863 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
PCGF1-204ENST00000475863 CHD1O14646 1710 aa22.96■■□□□ 1.27
PCGF1-204ENST00000475863 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
PCGF1-204ENST00000475863 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
PCGF1-204ENST00000475863 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
PCGF1-204ENST00000475863 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
PCGF1-204ENST00000475863 CUL7Q14999 1698 aa22.83■■□□□ 1.24
PCGF1-204ENST00000475863 EEA1Q15075 1411 aa22.81■■□□□ 1.24
PCGF1-204ENST00000475863 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
PCGF1-204ENST00000475863 NUP160Q12769 1436 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms