RNA–Protein interactions for RNA: ENST00000475766.2

RSRP1-205, Transcript of arginine and serine rich protein 1, humanhuman

TSL 4

Gene RSRP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-205ENST00000475766 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.27
RSRP1-205ENST00000475766 ABCC9O60706 1549 aa27.92■■■□□ 2.06
RSRP1-205ENST00000475766 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
RSRP1-205ENST00000475766 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
RSRP1-205ENST00000475766 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
RSRP1-205ENST00000475766 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.724e-9■■■□□ 17.7
RSRP1-205ENST00000475766 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
RSRP1-205ENST00000475766 NACADO15069 1562 aa25.51■■□□□ 1.67
RSRP1-205ENST00000475766 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
RSRP1-205ENST00000475766 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
RSRP1-205ENST00000475766 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
RSRP1-205ENST00000475766 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
RSRP1-205ENST00000475766 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.61
RSRP1-205ENST00000475766 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
RSRP1-205ENST00000475766 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
RSRP1-205ENST00000475766 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
RSRP1-205ENST00000475766 CUX2O14529 1486 aa24.49■■□□□ 1.51
RSRP1-205ENST00000475766 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
RSRP1-205ENST00000475766 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
RSRP1-205ENST00000475766 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
RSRP1-205ENST00000475766 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
RSRP1-205ENST00000475766 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
RSRP1-205ENST00000475766 NESP48681 1621 aa23.66■■□□□ 1.38
RSRP1-205ENST00000475766 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
RSRP1-205ENST00000475766 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
RSRP1-205ENST00000475766 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
RSRP1-205ENST00000475766 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
RSRP1-205ENST00000475766 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
RSRP1-205ENST00000475766 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
RSRP1-205ENST00000475766 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
RSRP1-205ENST00000475766 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
RSRP1-205ENST00000475766 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
RSRP1-205ENST00000475766 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
RSRP1-205ENST00000475766 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.29
RSRP1-205ENST00000475766 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
RSRP1-205ENST00000475766 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
RSRP1-205ENST00000475766 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
RSRP1-205ENST00000475766 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
RSRP1-205ENST00000475766 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
RSRP1-205ENST00000475766 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
RSRP1-205ENST00000475766 WDR62O43379 1518 aa23.03■■□□□ 1.28
RSRP1-205ENST00000475766 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
RSRP1-205ENST00000475766 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
RSRP1-205ENST00000475766 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
RSRP1-205ENST00000475766 CADPSQ9ULU8 1353 aa22.79■■□□□ 1.24
RSRP1-205ENST00000475766 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
RSRP1-205ENST00000475766 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
RSRP1-205ENST00000475766 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
RSRP1-205ENST00000475766 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
RSRP1-205ENST00000475766 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
RSRP1-205ENST00000475766 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
RSRP1-205ENST00000475766 ZNF608Q9ULD9 1512 aaPredicted RBP22.42■■□□□ 1.18
RSRP1-205ENST00000475766 CFTRP13569 1480 aa22.3■■□□□ 1.16
RSRP1-205ENST00000475766 CHD1O14646 1710 aa22.29■■□□□ 1.16
RSRP1-205ENST00000475766 ILDR1Q86SU0 546 aaPredicted RBP22.29■■□□□ 1.16
RSRP1-205ENST00000475766 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
RSRP1-205ENST00000475766 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
RSRP1-205ENST00000475766 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
RSRP1-205ENST00000475766 WIZO95785 1651 aa22.2■■□□□ 1.15
RSRP1-205ENST00000475766 FBLN2P98095 1184 aa22.12■■□□□ 1.13
RSRP1-205ENST00000475766 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.122e-17■■■■■ 29.4
RSRP1-205ENST00000475766 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
RSRP1-205ENST00000475766 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
RSRP1-205ENST00000475766 PRDM2Q13029 1718 aa22■■□□□ 1.11
RSRP1-205ENST00000475766 TARBP1Q13395 1621 aaKnown RBP21.92■■□□□ 1.1
RSRP1-205ENST00000475766 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
RSRP1-205ENST00000475766 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
RSRP1-205ENST00000475766 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
RSRP1-205ENST00000475766 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
RSRP1-205ENST00000475766 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
RSRP1-205ENST00000475766 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
RSRP1-205ENST00000475766 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
RSRP1-205ENST00000475766 KDM4FA0A1W2PPD8 638 aa21.73■■□□□ 1.07
RSRP1-205ENST00000475766 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
RSRP1-205ENST00000475766 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
RSRP1-205ENST00000475766 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
RSRP1-205ENST00000475766 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
RSRP1-205ENST00000475766 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
RSRP1-205ENST00000475766 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
RSRP1-205ENST00000475766 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
RSRP1-205ENST00000475766 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.04
RSRP1-205ENST00000475766 SOGA1O94964 1423 aa21.57■■□□□ 1.04
RSRP1-205ENST00000475766 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
RSRP1-205ENST00000475766 GRIN2BQ13224 1484 aa21.53■■□□□ 1.04
RSRP1-205ENST00000475766 KDM6BO15054 1643 aa21.46■■□□□ 1.03
RSRP1-205ENST00000475766 FGD5Q6ZNL6 1462 aa21.43■■□□□ 1.02
RSRP1-205ENST00000475766 HECW2Q9P2P5 1572 aa21.43■■□□□ 1.02
RSRP1-205ENST00000475766 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
RSRP1-205ENST00000475766 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
RSRP1-205ENST00000475766 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
RSRP1-205ENST00000475766 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.01
RSRP1-205ENST00000475766 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
RSRP1-205ENST00000475766 ADGRL1O94910 1474 aa21.32■■□□□ 1
RSRP1-205ENST00000475766 FBXO41Q8TF61 875 aa21.31■■□□□ 1
RSRP1-205ENST00000475766 SHROOM2Q13796 1616 aa21.29■■□□□ 1
RSRP1-205ENST00000475766 GRIN2AQ12879 1464 aa21.27■■□□□ 1
RSRP1-205ENST00000475766 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
RSRP1-205ENST00000475766 NUP160Q12769 1436 aa21.23■□□□□ 0.99
RSRP1-205ENST00000475766 TSPOAP1O95153 1857 aa21.23■□□□□ 0.99
RSRP1-205ENST00000475766 CUX1P39880 1505 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms