RNA–Protein interactions for RNA: ENST00000475727.1

LHX9-205, Transcript of LIM homeobox 9, humanhuman

TSL 1 (best)

Gene LHX9, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-205ENST00000475727 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
LHX9-205ENST00000475727 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
LHX9-205ENST00000475727 ABCC9O60706 1549 aa21.66■■□□□ 1.06
LHX9-205ENST00000475727 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
LHX9-205ENST00000475727 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
LHX9-205ENST00000475727 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
LHX9-205ENST00000475727 NACADO15069 1562 aa21.05■□□□□ 0.96
LHX9-205ENST00000475727 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
LHX9-205ENST00000475727 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
LHX9-205ENST00000475727 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
LHX9-205ENST00000475727 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
LHX9-205ENST00000475727 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
LHX9-205ENST00000475727 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
LHX9-205ENST00000475727 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
LHX9-205ENST00000475727 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
LHX9-205ENST00000475727 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
LHX9-205ENST00000475727 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
LHX9-205ENST00000475727 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
LHX9-205ENST00000475727 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
LHX9-205ENST00000475727 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
LHX9-205ENST00000475727 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
LHX9-205ENST00000475727 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
LHX9-205ENST00000475727 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
LHX9-205ENST00000475727 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
LHX9-205ENST00000475727 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
LHX9-205ENST00000475727 WIZO95785 1651 aa19.43■□□□□ 0.7
LHX9-205ENST00000475727 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
LHX9-205ENST00000475727 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
LHX9-205ENST00000475727 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
LHX9-205ENST00000475727 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
LHX9-205ENST00000475727 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
LHX9-205ENST00000475727 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
LHX9-205ENST00000475727 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
LHX9-205ENST00000475727 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
LHX9-205ENST00000475727 NESP48681 1621 aa18.82■□□□□ 0.6
LHX9-205ENST00000475727 CFTRP13569 1480 aa18.82■□□□□ 0.6
LHX9-205ENST00000475727 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
LHX9-205ENST00000475727 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
LHX9-205ENST00000475727 ERCC6Q03468 1493 aa18.7■□□□□ 0.58
LHX9-205ENST00000475727 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
LHX9-205ENST00000475727 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
LHX9-205ENST00000475727 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
LHX9-205ENST00000475727 MRC2Q9UBG0 1479 aa18.51■□□□□ 0.55
LHX9-205ENST00000475727 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
LHX9-205ENST00000475727 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
LHX9-205ENST00000475727 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
LHX9-205ENST00000475727 URB2Q14146 1524 aaKnown RBP18.43■□□□□ 0.54
LHX9-205ENST00000475727 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
LHX9-205ENST00000475727 WDR62O43379 1518 aa18.4■□□□□ 0.54
LHX9-205ENST00000475727 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
LHX9-205ENST00000475727 CUX1P39880 1505 aa18.38■□□□□ 0.53
LHX9-205ENST00000475727 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
LHX9-205ENST00000475727 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
LHX9-205ENST00000475727 CUX2O14529 1486 aa18.32■□□□□ 0.52
LHX9-205ENST00000475727 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
LHX9-205ENST00000475727 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
LHX9-205ENST00000475727 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
LHX9-205ENST00000475727 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
LHX9-205ENST00000475727 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
LHX9-205ENST00000475727 SOGA1O94964 1423 aa18.23■□□□□ 0.51
LHX9-205ENST00000475727 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
LHX9-205ENST00000475727 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
LHX9-205ENST00000475727 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
LHX9-205ENST00000475727 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
LHX9-205ENST00000475727 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
LHX9-205ENST00000475727 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
LHX9-205ENST00000475727 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
LHX9-205ENST00000475727 KIF27Q86VH2 1401 aa18.04■□□□□ 0.48
LHX9-205ENST00000475727 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.48
LHX9-205ENST00000475727 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
LHX9-205ENST00000475727 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
LHX9-205ENST00000475727 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
LHX9-205ENST00000475727 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
LHX9-205ENST00000475727 EEA1Q15075 1411 aa17.95■□□□□ 0.46
LHX9-205ENST00000475727 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
LHX9-205ENST00000475727 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
LHX9-205ENST00000475727 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
LHX9-205ENST00000475727 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
LHX9-205ENST00000475727 IGF1RP08069 1367 aa17.89■□□□□ 0.45
LHX9-205ENST00000475727 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
LHX9-205ENST00000475727 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
LHX9-205ENST00000475727 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
LHX9-205ENST00000475727 CUL7Q14999 1698 aa17.83■□□□□ 0.45
LHX9-205ENST00000475727 FBLN2P98095 1184 aa17.83■□□□□ 0.44
LHX9-205ENST00000475727 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.44
LHX9-205ENST00000475727 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
LHX9-205ENST00000475727 CARMIL1Q5VZK9 1371 aa17.82■□□□□ 0.44
LHX9-205ENST00000475727 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
LHX9-205ENST00000475727 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
LHX9-205ENST00000475727 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
LHX9-205ENST00000475727 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
LHX9-205ENST00000475727 CHD1O14646 1710 aa17.73■□□□□ 0.43
LHX9-205ENST00000475727 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
LHX9-205ENST00000475727 KIF21BO75037 1637 aa17.69■□□□□ 0.42
LHX9-205ENST00000475727 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
LHX9-205ENST00000475727 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
LHX9-205ENST00000475727 GOLGA3Q08378 1498 aa17.65■□□□□ 0.42
LHX9-205ENST00000475727 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
LHX9-205ENST00000475727 NUP160Q12769 1436 aa17.61■□□□□ 0.41
LHX9-205ENST00000475727 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms