RNA–Protein interactions for RNA: ENST00000475700.1

DDX20-202, Transcript of DEAD-box helicase 20, humanhuman

TSL 2 BASIC

Gene DDX20, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20-202ENST00000475700 NISCHQ9Y2I1 1504 aa11.3□□□□□ -0.6
DDX20-202ENST00000475700 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
DDX20-202ENST00000475700 ABCC9O60706 1549 aa9.65□□□□□ -0.86
DDX20-202ENST00000475700 ZCCHC6Q5VYS8 1495 aaKnown RBP9.44□□□□□ -0.9
DDX20-202ENST00000475700 DCAF8L2P0C7V8 631 aa9.4□□□□□ -0.9
DDX20-202ENST00000475700 NACADO15069 1562 aa9.35□□□□□ -0.91
DDX20-202ENST00000475700 RB1CC1Q8TDY2 1594 aa9.34□□□□□ -0.91
DDX20-202ENST00000475700 DCAF1Q9Y4B6 1507 aa9.34□□□□□ -0.91
DDX20-202ENST00000475700 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
DDX20-202ENST00000475700 UNC13AQ9UPW8 1703 aa9.16□□□□□ -0.94
DDX20-202ENST00000475700 SCRIBQ14160 1630 aa9.15□□□□□ -0.94
DDX20-202ENST00000475700 BICRAQ9NZM4 1560 aa9.05□□□□□ -0.96
DDX20-202ENST00000475700 PABPN1Q86U42 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDX20-202ENST00000475700 SHROOM4Q9ULL8 1493 aa9.04□□□□□ -0.96
DDX20-202ENST00000475700 EIF4G1Q04637 1599 aaKnown RBP8.8□□□□□ -1
DDX20-202ENST00000475700 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
DDX20-202ENST00000475700 SMARCA4P51532 1647 aa8.75□□□□□ -1.01
DDX20-202ENST00000475700 BAZ1AQ9NRL2 1556 aaPredicted RBP8.75□□□□□ -1.01
DDX20-202ENST00000475700 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
DDX20-202ENST00000475700 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
DDX20-202ENST00000475700 DNAJC5BQ9UF47 199 aa8.71□□□□□ -1.02
DDX20-202ENST00000475700 SMARCA2P51531 1590 aa8.66□□□□□ -1.02
DDX20-202ENST00000475700 RSF1Q96T23 1441 aaPredicted RBP8.66□□□□□ -1.02
DDX20-202ENST00000475700 ATAD2BQ9ULI0 1458 aa8.65□□□□□ -1.02
DDX20-202ENST00000475700 WIZO95785 1651 aa8.65□□□□□ -1.03
DDX20-202ENST00000475700 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
DDX20-202ENST00000475700 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
DDX20-202ENST00000475700 BAZ1BQ9UIG0 1483 aaKnown RBP8.6□□□□□ -1.03
DDX20-202ENST00000475700 HMGXB3Q12766 1538 aa8.6□□□□□ -1.03
DDX20-202ENST00000475700 SUPT5HO00267 1087 aaKnown RBP8.56□□□□□ -1.04
DDX20-202ENST00000475700 TOP2AP11388 1531 aaKnown RBP8.55□□□□□ -1.04
DDX20-202ENST00000475700 CCDC88BA6NC98 1476 aa8.44□□□□□ -1.06
DDX20-202ENST00000475700 NESP48681 1621 aa8.39□□□□□ -1.07
DDX20-202ENST00000475700 LAMC3Q9Y6N6 1575 aa8.39□□□□□ -1.07
DDX20-202ENST00000475700 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
DDX20-202ENST00000475700 CFTRP13569 1480 aa8.36□□□□□ -1.07
DDX20-202ENST00000475700 PRDM2Q13029 1718 aa8.35□□□□□ -1.07
DDX20-202ENST00000475700 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
DDX20-202ENST00000475700 PDS5BQ9NTI5 1447 aa8.32□□□□□ -1.08
DDX20-202ENST00000475700 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
DDX20-202ENST00000475700 FANCD2Q9BXW9 1451 aa8.29□□□□□ -1.08
DDX20-202ENST00000475700 CEP164Q9UPV0 1460 aa8.28□□□□□ -1.08
DDX20-202ENST00000475700 THOC2Q8NI27 1593 aaKnown RBP8.24□□□□□ -1.09
DDX20-202ENST00000475700 MRC2Q9UBG0 1479 aa8.23□□□□□ -1.09
DDX20-202ENST00000475700 URB2Q14146 1524 aaKnown RBP8.2□□□□□ -1.1
DDX20-202ENST00000475700 WDR62O43379 1518 aa8.2□□□□□ -1.1
DDX20-202ENST00000475700 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
DDX20-202ENST00000475700 DNMBPQ6XZF7 1577 aa8.19□□□□□ -1.1
DDX20-202ENST00000475700 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
DDX20-202ENST00000475700 CUX1P39880 1505 aa8.17□□□□□ -1.1
DDX20-202ENST00000475700 WRNQ14191 1432 aaPredicted RBP eCLIP8.16□□□□□ -1.1
DDX20-202ENST00000475700 CUX2O14529 1486 aa8.16□□□□□ -1.1
DDX20-202ENST00000475700 SYNJ1O43426 1573 aa8.15□□□□□ -1.1
DDX20-202ENST00000475700 BIVM-ERCC5R4GMW8 1640 aa8.15□□□□□ -1.11
DDX20-202ENST00000475700 TOP2BQ02880 1626 aa8.14□□□□□ -1.11
DDX20-202ENST00000475700 FGD5Q6ZNL6 1462 aa8.12□□□□□ -1.11
DDX20-202ENST00000475700 POLA1P09884 1462 aaPredicted RBP8.11□□□□□ -1.11
DDX20-202ENST00000475700 IFT140Q96RY7 1462 aa8.09□□□□□ -1.11
DDX20-202ENST00000475700 RAD54L2Q9Y4B4 1467 aa8.09□□□□□ -1.12
DDX20-202ENST00000475700 SOGA1O94964 1423 aa8.08□□□□□ -1.12
DDX20-202ENST00000475700 TARBP1Q13395 1621 aaKnown RBP8.08□□□□□ -1.12
DDX20-202ENST00000475700 TRIM41Q8WV44 630 aa8.07□□□□□ -1.12
DDX20-202ENST00000475700 WDR97A6NE52 1622 aa8.06□□□□□ -1.12
DDX20-202ENST00000475700 CHIC1Q5VXU3 224 aa8.05□□□□□ -1.12
DDX20-202ENST00000475700 ZNF608Q9ULD9 1512 aaPredicted RBP8.04□□□□□ -1.12
DDX20-202ENST00000475700 ABCA10Q8WWZ4 1543 aa8.04□□□□□ -1.12
DDX20-202ENST00000475700 EIF4G3O43432 1585 aaKnown RBP8.04□□□□□ -1.12
DDX20-202ENST00000475700 TDRD9Q8NDG6 1382 aaKnown RBP8.02□□□□□ -1.13
DDX20-202ENST00000475700 AQRO60306 1485 aaKnown RBP eCLIP8.02□□□□□ -1.133e-6■■■■□ 22.4
DDX20-202ENST00000475700 ABCA5Q8WWZ7 1642 aa8.01□□□□□ -1.13
DDX20-202ENST00000475700 PBRM1Q86U86 1689 aa8□□□□□ -1.13
DDX20-202ENST00000475700 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
DDX20-202ENST00000475700 KIF27Q86VH2 1401 aa7.98□□□□□ -1.13
DDX20-202ENST00000475700 GRIN2BQ13224 1484 aa7.97□□□□□ -1.13
DDX20-202ENST00000475700 RUSC2Q8N2Y8 1516 aa7.96□□□□□ -1.14
DDX20-202ENST00000475700 SNAPC4Q5SXM2 1469 aa7.96□□□□□ -1.14
DDX20-202ENST00000475700 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
DDX20-202ENST00000475700 MAGI1Q96QZ7 1491 aaPredicted RBP7.94□□□□□ -1.14
DDX20-202ENST00000475700 ADAMTS12P58397 1594 aa7.93□□□□□ -1.14
DDX20-202ENST00000475700 CUL7Q14999 1698 aa7.92□□□□□ -1.14
DDX20-202ENST00000475700 CHD1O14646 1710 aa7.92□□□□□ -1.14
DDX20-202ENST00000475700 IGF1RP08069 1367 aa7.92□□□□□ -1.14
DDX20-202ENST00000475700 FAM9AQ8IZU1 332 aaPredicted RBP7.92□□□□□ -1.14
DDX20-202ENST00000475700 EEA1Q15075 1411 aa7.92□□□□□ -1.14
DDX20-202ENST00000475700 SYNJ2O15056 1496 aa7.91□□□□□ -1.14
DDX20-202ENST00000475700 FBLN2P98095 1184 aa7.91□□□□□ -1.14
DDX20-202ENST00000475700 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
DDX20-202ENST00000475700 CHMP7Q8WUX9 453 aaPredicted RBP7.89□□□□□ -1.15
DDX20-202ENST00000475700 CARMIL1Q5VZK9 1371 aa7.89□□□□□ -1.15
DDX20-202ENST00000475700 CSRNP3Q8WYN3 585 aa7.89□□□□□ -1.15
DDX20-202ENST00000475700 GRIN2AQ12879 1464 aa7.87□□□□□ -1.15
DDX20-202ENST00000475700 RAPGEF2Q9Y4G8 1499 aa7.86□□□□□ -1.15
DDX20-202ENST00000475700 PRXQ9BXM0 1461 aa7.85□□□□□ -1.15
DDX20-202ENST00000475700 OSCARQ8IYS5 282 aa7.84□□□□□ -1.15
DDX20-202ENST00000475700 KIF21BO75037 1637 aa7.84□□□□□ -1.15
DDX20-202ENST00000475700 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
DDX20-202ENST00000475700 EHMT2Q96KQ7 1210 aa7.82□□□□□ -1.16
DDX20-202ENST00000475700 NUP160Q12769 1436 aa7.82□□□□□ -1.16
DDX20-202ENST00000475700 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
DDX20-202ENST00000475700 CLASP1Q7Z460 1538 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms