RNA–Protein interactions for RNA: ENST00000475656.6

ABRAXAS1-202, Transcript of abraxas 1, BRCA1 A complex subunit, humanhuman

TSL 2

Gene ABRAXAS1, Length 2,718 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABRAXAS1-202ENST00000475656 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
ABRAXAS1-202ENST00000475656 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.58
ABRAXAS1-202ENST00000475656 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
ABRAXAS1-202ENST00000475656 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
ABRAXAS1-202ENST00000475656 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
ABRAXAS1-202ENST00000475656 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
ABRAXAS1-202ENST00000475656 ABCC9O60706 1549 aa23.5■■□□□ 1.35
ABRAXAS1-202ENST00000475656 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
ABRAXAS1-202ENST00000475656 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
ABRAXAS1-202ENST00000475656 NACADO15069 1562 aa23.16■■□□□ 1.3
ABRAXAS1-202ENST00000475656 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
ABRAXAS1-202ENST00000475656 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
ABRAXAS1-202ENST00000475656 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
ABRAXAS1-202ENST00000475656 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
ABRAXAS1-202ENST00000475656 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
ABRAXAS1-202ENST00000475656 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
ABRAXAS1-202ENST00000475656 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
ABRAXAS1-202ENST00000475656 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.16
ABRAXAS1-202ENST00000475656 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
ABRAXAS1-202ENST00000475656 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
ABRAXAS1-202ENST00000475656 WIZO95785 1651 aa22.25■■□□□ 1.15
ABRAXAS1-202ENST00000475656 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
ABRAXAS1-202ENST00000475656 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
ABRAXAS1-202ENST00000475656 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
ABRAXAS1-202ENST00000475656 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
ABRAXAS1-202ENST00000475656 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
ABRAXAS1-202ENST00000475656 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
ABRAXAS1-202ENST00000475656 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
ABRAXAS1-202ENST00000475656 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
ABRAXAS1-202ENST00000475656 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
ABRAXAS1-202ENST00000475656 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
ABRAXAS1-202ENST00000475656 FAM9AQ8IZU1 332 aaPredicted RBP21.59■■□□□ 1.05
ABRAXAS1-202ENST00000475656 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
ABRAXAS1-202ENST00000475656 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
ABRAXAS1-202ENST00000475656 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
ABRAXAS1-202ENST00000475656 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
ABRAXAS1-202ENST00000475656 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
ABRAXAS1-202ENST00000475656 SOGA1O94964 1423 aa21.2■□□□□ 0.98
ABRAXAS1-202ENST00000475656 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
ABRAXAS1-202ENST00000475656 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
ABRAXAS1-202ENST00000475656 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
ABRAXAS1-202ENST00000475656 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
ABRAXAS1-202ENST00000475656 CFTRP13569 1480 aa21.06■□□□□ 0.96
ABRAXAS1-202ENST00000475656 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
ABRAXAS1-202ENST00000475656 EEA1Q15075 1411 aa21.05■□□□□ 0.96
ABRAXAS1-202ENST00000475656 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
ABRAXAS1-202ENST00000475656 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
ABRAXAS1-202ENST00000475656 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
ABRAXAS1-202ENST00000475656 CUX1P39880 1505 aa20.91■□□□□ 0.94
ABRAXAS1-202ENST00000475656 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
ABRAXAS1-202ENST00000475656 TRIM26Q12899 539 aaPredicted RBP20.88■□□□□ 0.93
ABRAXAS1-202ENST00000475656 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
ABRAXAS1-202ENST00000475656 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
ABRAXAS1-202ENST00000475656 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
ABRAXAS1-202ENST00000475656 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
ABRAXAS1-202ENST00000475656 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
ABRAXAS1-202ENST00000475656 KIF21BO75037 1637 aa20.77■□□□□ 0.92
ABRAXAS1-202ENST00000475656 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.91
ABRAXAS1-202ENST00000475656 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
ABRAXAS1-202ENST00000475656 NESP48681 1621 aa20.75■□□□□ 0.91
ABRAXAS1-202ENST00000475656 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
ABRAXAS1-202ENST00000475656 RAPGEF2Q9Y4G8 1499 aa20.72■□□□□ 0.91
ABRAXAS1-202ENST00000475656 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
ABRAXAS1-202ENST00000475656 HRCP23327 699 aa20.68■□□□□ 0.9
ABRAXAS1-202ENST00000475656 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
ABRAXAS1-202ENST00000475656 PRXQ9BXM0 1461 aa20.61■□□□□ 0.89
ABRAXAS1-202ENST00000475656 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
ABRAXAS1-202ENST00000475656 CUX2O14529 1486 aa20.59■□□□□ 0.89
ABRAXAS1-202ENST00000475656 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
ABRAXAS1-202ENST00000475656 CLIP1P30622 1438 aa20.58■□□□□ 0.88
ABRAXAS1-202ENST00000475656 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
ABRAXAS1-202ENST00000475656 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
ABRAXAS1-202ENST00000475656 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
ABRAXAS1-202ENST00000475656 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
ABRAXAS1-202ENST00000475656 IGF1RP08069 1367 aa20.5■□□□□ 0.87
ABRAXAS1-202ENST00000475656 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
ABRAXAS1-202ENST00000475656 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
ABRAXAS1-202ENST00000475656 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
ABRAXAS1-202ENST00000475656 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
ABRAXAS1-202ENST00000475656 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
ABRAXAS1-202ENST00000475656 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
ABRAXAS1-202ENST00000475656 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
ABRAXAS1-202ENST00000475656 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
ABRAXAS1-202ENST00000475656 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
ABRAXAS1-202ENST00000475656 APLP2Q06481 763 aa20.3■□□□□ 0.84
ABRAXAS1-202ENST00000475656 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
ABRAXAS1-202ENST00000475656 ARHGAP35Q9NRY4 1499 aa20.25■□□□□ 0.83
ABRAXAS1-202ENST00000475656 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
ABRAXAS1-202ENST00000475656 MRC2Q9UBG0 1479 aa20.2■□□□□ 0.82
ABRAXAS1-202ENST00000475656 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
ABRAXAS1-202ENST00000475656 ABCA5Q8WWZ7 1642 aa20.18■□□□□ 0.82
ABRAXAS1-202ENST00000475656 CUL7Q14999 1698 aa20.18■□□□□ 0.82
ABRAXAS1-202ENST00000475656 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
ABRAXAS1-202ENST00000475656 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
ABRAXAS1-202ENST00000475656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.82
ABRAXAS1-202ENST00000475656 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
ABRAXAS1-202ENST00000475656 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
ABRAXAS1-202ENST00000475656 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.8
ABRAXAS1-202ENST00000475656 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
ABRAXAS1-202ENST00000475656 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms