RNA–Protein interactions for RNA: ENST00000475630.5

SFXN5-212, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-212ENST00000475630 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
SFXN5-212ENST00000475630 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.85
SFXN5-212ENST00000475630 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
SFXN5-212ENST00000475630 ABCC9O60706 1549 aa25.32■■□□□ 1.64
SFXN5-212ENST00000475630 DCAF1Q9Y4B6 1507 aa25.19■■□□□ 1.62
SFXN5-212ENST00000475630 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
SFXN5-212ENST00000475630 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
SFXN5-212ENST00000475630 NACADO15069 1562 aa24.95■■□□□ 1.58
SFXN5-212ENST00000475630 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
SFXN5-212ENST00000475630 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
SFXN5-212ENST00000475630 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
SFXN5-212ENST00000475630 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
SFXN5-212ENST00000475630 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
SFXN5-212ENST00000475630 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
SFXN5-212ENST00000475630 BAZ1AQ9NRL2 1556 aaPredicted RBP23.46■■□□□ 1.35
SFXN5-212ENST00000475630 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
SFXN5-212ENST00000475630 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
SFXN5-212ENST00000475630 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
SFXN5-212ENST00000475630 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
SFXN5-212ENST00000475630 MROH2BQ7Z745 1585 aa23.25■■□□□ 1.31
SFXN5-212ENST00000475630 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
SFXN5-212ENST00000475630 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
SFXN5-212ENST00000475630 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
SFXN5-212ENST00000475630 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
SFXN5-212ENST00000475630 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
SFXN5-212ENST00000475630 WIZO95785 1651 aa22.99■■□□□ 1.27
SFXN5-212ENST00000475630 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
SFXN5-212ENST00000475630 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
SFXN5-212ENST00000475630 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
SFXN5-212ENST00000475630 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
SFXN5-212ENST00000475630 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
SFXN5-212ENST00000475630 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
SFXN5-212ENST00000475630 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
SFXN5-212ENST00000475630 CFTRP13569 1480 aa22.35■■□□□ 1.17
SFXN5-212ENST00000475630 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
SFXN5-212ENST00000475630 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
SFXN5-212ENST00000475630 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
SFXN5-212ENST00000475630 NESP48681 1621 aa22.06■■□□□ 1.12
SFXN5-212ENST00000475630 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
SFXN5-212ENST00000475630 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
SFXN5-212ENST00000475630 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
SFXN5-212ENST00000475630 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
SFXN5-212ENST00000475630 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
SFXN5-212ENST00000475630 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
SFXN5-212ENST00000475630 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
SFXN5-212ENST00000475630 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
SFXN5-212ENST00000475630 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
SFXN5-212ENST00000475630 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
SFXN5-212ENST00000475630 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
SFXN5-212ENST00000475630 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
SFXN5-212ENST00000475630 CUX1P39880 1505 aa21.78■■□□□ 1.08
SFXN5-212ENST00000475630 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
SFXN5-212ENST00000475630 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
SFXN5-212ENST00000475630 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
SFXN5-212ENST00000475630 WDR62O43379 1518 aa21.7■■□□□ 1.07
SFXN5-212ENST00000475630 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
SFXN5-212ENST00000475630 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
SFXN5-212ENST00000475630 EEA1Q15075 1411 aa21.62■■□□□ 1.05
SFXN5-212ENST00000475630 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
SFXN5-212ENST00000475630 SOGA1O94964 1423 aa21.59■■□□□ 1.05
SFXN5-212ENST00000475630 IFT140Q96RY7 1462 aa21.54■■□□□ 1.04
SFXN5-212ENST00000475630 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
SFXN5-212ENST00000475630 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
SFXN5-212ENST00000475630 CUX2O14529 1486 aa21.49■■□□□ 1.03
SFXN5-212ENST00000475630 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
SFXN5-212ENST00000475630 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
SFXN5-212ENST00000475630 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
SFXN5-212ENST00000475630 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
SFXN5-212ENST00000475630 GAPVD1Q14C86 1478 aa21.33■■□□□ 1.01
SFXN5-212ENST00000475630 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
SFXN5-212ENST00000475630 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
SFXN5-212ENST00000475630 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
SFXN5-212ENST00000475630 IGF1RP08069 1367 aa21.3■■□□□ 1
SFXN5-212ENST00000475630 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
SFXN5-212ENST00000475630 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
SFXN5-212ENST00000475630 GRIN2BQ13224 1484 aa21.27■■□□□ 1
SFXN5-212ENST00000475630 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.994e-8■■■■□ 21.3
SFXN5-212ENST00000475630 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
SFXN5-212ENST00000475630 CUL7Q14999 1698 aa21.21■□□□□ 0.99
SFXN5-212ENST00000475630 PRXQ9BXM0 1461 aa21.21■□□□□ 0.99
SFXN5-212ENST00000475630 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
SFXN5-212ENST00000475630 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
SFXN5-212ENST00000475630 KIF21BO75037 1637 aa21.19■□□□□ 0.98
SFXN5-212ENST00000475630 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
SFXN5-212ENST00000475630 FHAD1B1AJZ9 1412 aa21.16■□□□□ 0.98
SFXN5-212ENST00000475630 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
SFXN5-212ENST00000475630 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
SFXN5-212ENST00000475630 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
SFXN5-212ENST00000475630 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
SFXN5-212ENST00000475630 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
SFXN5-212ENST00000475630 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
SFXN5-212ENST00000475630 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
SFXN5-212ENST00000475630 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
SFXN5-212ENST00000475630 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
SFXN5-212ENST00000475630 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
SFXN5-212ENST00000475630 GRIN2AQ12879 1464 aa20.95■□□□□ 0.94
SFXN5-212ENST00000475630 FBLN2P98095 1184 aa20.89■□□□□ 0.93
SFXN5-212ENST00000475630 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
SFXN5-212ENST00000475630 KIAA0586Q9BVV6 1533 aa20.86■□□□□ 0.93
SFXN5-212ENST00000475630 NUP160Q12769 1436 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms