RNA–Protein interactions for RNA: ENST00000475554.5

SZRD1-207, Transcript of SUZ RNA binding domain containing 1, humanhuman

TSL 3

Gene SZRD1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-207ENST00000475554 NISCHQ9Y2I1 1504 aa25.93■■□□□ 1.74
SZRD1-207ENST00000475554 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
SZRD1-207ENST00000475554 ABCC9O60706 1549 aa22.18■■□□□ 1.14
SZRD1-207ENST00000475554 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
SZRD1-207ENST00000475554 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
SZRD1-207ENST00000475554 NACADO15069 1562 aa21.51■■□□□ 1.03
SZRD1-207ENST00000475554 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
SZRD1-207ENST00000475554 DCAF1Q9Y4B6 1507 aa21.47■■□□□ 1.03
SZRD1-207ENST00000475554 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
SZRD1-207ENST00000475554 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
SZRD1-207ENST00000475554 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
SZRD1-207ENST00000475554 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
SZRD1-207ENST00000475554 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
SZRD1-207ENST00000475554 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
SZRD1-207ENST00000475554 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
SZRD1-207ENST00000475554 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.81
SZRD1-207ENST00000475554 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
SZRD1-207ENST00000475554 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
SZRD1-207ENST00000475554 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.8
SZRD1-207ENST00000475554 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.79
SZRD1-207ENST00000475554 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
SZRD1-207ENST00000475554 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
SZRD1-207ENST00000475554 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
SZRD1-207ENST00000475554 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
SZRD1-207ENST00000475554 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
SZRD1-207ENST00000475554 PEG3Q9GZU2 1588 aa19.82■□□□□ 0.76
SZRD1-207ENST00000475554 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
SZRD1-207ENST00000475554 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
SZRD1-207ENST00000475554 WIZO95785 1651 aa19.71■□□□□ 0.75
SZRD1-207ENST00000475554 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
SZRD1-207ENST00000475554 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
SZRD1-207ENST00000475554 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
SZRD1-207ENST00000475554 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
SZRD1-207ENST00000475554 LAMC3Q9Y6N6 1575 aa19.26■□□□□ 0.67
SZRD1-207ENST00000475554 CFTRP13569 1480 aa19.22■□□□□ 0.67
SZRD1-207ENST00000475554 NESP48681 1621 aa19.22■□□□□ 0.67
SZRD1-207ENST00000475554 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
SZRD1-207ENST00000475554 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
SZRD1-207ENST00000475554 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
SZRD1-207ENST00000475554 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
SZRD1-207ENST00000475554 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
SZRD1-207ENST00000475554 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
SZRD1-207ENST00000475554 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
SZRD1-207ENST00000475554 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
SZRD1-207ENST00000475554 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
SZRD1-207ENST00000475554 WDR62O43379 1518 aa18.82■□□□□ 0.6
SZRD1-207ENST00000475554 CUX2O14529 1486 aa18.82■□□□□ 0.6
SZRD1-207ENST00000475554 URB2Q14146 1524 aaKnown RBP18.81■□□□□ 0.6
SZRD1-207ENST00000475554 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.69e-6■■■■■ 50.1
SZRD1-207ENST00000475554 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
SZRD1-207ENST00000475554 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
SZRD1-207ENST00000475554 CUX1P39880 1505 aa18.71■□□□□ 0.59
SZRD1-207ENST00000475554 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
SZRD1-207ENST00000475554 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
SZRD1-207ENST00000475554 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
SZRD1-207ENST00000475554 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
SZRD1-207ENST00000475554 TRIM41Q8WV44 630 aa18.62■□□□□ 0.57
SZRD1-207ENST00000475554 SOGA1O94964 1423 aa18.62■□□□□ 0.57
SZRD1-207ENST00000475554 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
SZRD1-207ENST00000475554 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
SZRD1-207ENST00000475554 RAD54L2Q9Y4B4 1467 aa18.55■□□□□ 0.56
SZRD1-207ENST00000475554 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
SZRD1-207ENST00000475554 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
SZRD1-207ENST00000475554 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
SZRD1-207ENST00000475554 TDRD9Q8NDG6 1382 aaKnown RBP18.46■□□□□ 0.55
SZRD1-207ENST00000475554 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
SZRD1-207ENST00000475554 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
SZRD1-207ENST00000475554 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.546e-7■■■□□ 18.8
SZRD1-207ENST00000475554 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
SZRD1-207ENST00000475554 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.54
SZRD1-207ENST00000475554 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
SZRD1-207ENST00000475554 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
SZRD1-207ENST00000475554 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
SZRD1-207ENST00000475554 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
SZRD1-207ENST00000475554 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
SZRD1-207ENST00000475554 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
SZRD1-207ENST00000475554 FBLN2P98095 1184 aa18.27■□□□□ 0.52
SZRD1-207ENST00000475554 EEA1Q15075 1411 aa18.26■□□□□ 0.51
SZRD1-207ENST00000475554 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
SZRD1-207ENST00000475554 IGF1RP08069 1367 aa18.24■□□□□ 0.51
SZRD1-207ENST00000475554 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
SZRD1-207ENST00000475554 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
SZRD1-207ENST00000475554 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
SZRD1-207ENST00000475554 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
SZRD1-207ENST00000475554 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
SZRD1-207ENST00000475554 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
SZRD1-207ENST00000475554 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
SZRD1-207ENST00000475554 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
SZRD1-207ENST00000475554 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
SZRD1-207ENST00000475554 CUL7Q14999 1698 aa18.14■□□□□ 0.49
SZRD1-207ENST00000475554 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
SZRD1-207ENST00000475554 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
SZRD1-207ENST00000475554 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
SZRD1-207ENST00000475554 CHD1O14646 1710 aa18.03■□□□□ 0.48
SZRD1-207ENST00000475554 NUP160Q12769 1436 aa18■□□□□ 0.47
SZRD1-207ENST00000475554 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
SZRD1-207ENST00000475554 KIF21BO75037 1637 aa17.94■□□□□ 0.46
SZRD1-207ENST00000475554 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
SZRD1-207ENST00000475554 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
SZRD1-207ENST00000475554 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms