RNA–Protein interactions for RNA: ENST00000475463.6

PCNX2-209, Transcript of pecanex 2, humanhuman

TSL 1 (best)

Gene PCNX2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-209ENST00000475463 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
PCNX2-209ENST00000475463 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
PCNX2-209ENST00000475463 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
PCNX2-209ENST00000475463 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
PCNX2-209ENST00000475463 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
PCNX2-209ENST00000475463 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
PCNX2-209ENST00000475463 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.33
PCNX2-209ENST00000475463 ABCC9O60706 1549 aa23.29■■□□□ 1.32
PCNX2-209ENST00000475463 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
PCNX2-209ENST00000475463 NACADO15069 1562 aa23.14■■□□□ 1.29
PCNX2-209ENST00000475463 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
PCNX2-209ENST00000475463 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
PCNX2-209ENST00000475463 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
PCNX2-209ENST00000475463 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
PCNX2-209ENST00000475463 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
PCNX2-209ENST00000475463 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
PCNX2-209ENST00000475463 MROH2BQ7Z745 1585 aa22.4■■□□□ 1.18
PCNX2-209ENST00000475463 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
PCNX2-209ENST00000475463 WIZO95785 1651 aa22.26■■□□□ 1.15
PCNX2-209ENST00000475463 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
PCNX2-209ENST00000475463 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
PCNX2-209ENST00000475463 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
PCNX2-209ENST00000475463 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
PCNX2-209ENST00000475463 EIF4G1Q04637 1599 aaKnown RBP21.83■■□□□ 1.09
PCNX2-209ENST00000475463 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
PCNX2-209ENST00000475463 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
PCNX2-209ENST00000475463 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
PCNX2-209ENST00000475463 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
PCNX2-209ENST00000475463 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
PCNX2-209ENST00000475463 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
PCNX2-209ENST00000475463 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
PCNX2-209ENST00000475463 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
PCNX2-209ENST00000475463 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
PCNX2-209ENST00000475463 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
PCNX2-209ENST00000475463 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
PCNX2-209ENST00000475463 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
PCNX2-209ENST00000475463 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
PCNX2-209ENST00000475463 SOGA1O94964 1423 aa21.21■□□□□ 0.99
PCNX2-209ENST00000475463 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
PCNX2-209ENST00000475463 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
PCNX2-209ENST00000475463 EEA1Q15075 1411 aa21.13■□□□□ 0.97
PCNX2-209ENST00000475463 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
PCNX2-209ENST00000475463 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
PCNX2-209ENST00000475463 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
PCNX2-209ENST00000475463 CFTRP13569 1480 aa21.04■□□□□ 0.96
PCNX2-209ENST00000475463 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
PCNX2-209ENST00000475463 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
PCNX2-209ENST00000475463 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
PCNX2-209ENST00000475463 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
PCNX2-209ENST00000475463 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
PCNX2-209ENST00000475463 HRCP23327 699 aa20.9■□□□□ 0.94
PCNX2-209ENST00000475463 CUX1P39880 1505 aa20.9■□□□□ 0.94
PCNX2-209ENST00000475463 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
PCNX2-209ENST00000475463 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
PCNX2-209ENST00000475463 KIF21BO75037 1637 aa20.88■□□□□ 0.93
PCNX2-209ENST00000475463 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
PCNX2-209ENST00000475463 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
PCNX2-209ENST00000475463 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
PCNX2-209ENST00000475463 RAPGEF2Q9Y4G8 1499 aa20.73■□□□□ 0.91
PCNX2-209ENST00000475463 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
PCNX2-209ENST00000475463 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
PCNX2-209ENST00000475463 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
PCNX2-209ENST00000475463 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
PCNX2-209ENST00000475463 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
PCNX2-209ENST00000475463 NESP48681 1621 aa20.62■□□□□ 0.89
PCNX2-209ENST00000475463 CLIP1P30622 1438 aa20.6■□□□□ 0.89
PCNX2-209ENST00000475463 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
PCNX2-209ENST00000475463 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
PCNX2-209ENST00000475463 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
PCNX2-209ENST00000475463 CUX2O14529 1486 aa20.54■□□□□ 0.88
PCNX2-209ENST00000475463 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
PCNX2-209ENST00000475463 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
PCNX2-209ENST00000475463 IGF1RP08069 1367 aa20.49■□□□□ 0.87
PCNX2-209ENST00000475463 VPS8Q8N3P4 1428 aa20.48■□□□□ 0.87
PCNX2-209ENST00000475463 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
PCNX2-209ENST00000475463 TTBK1Q5TCY1 1321 aaPredicted RBP20.41■□□□□ 0.86
PCNX2-209ENST00000475463 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
PCNX2-209ENST00000475463 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
PCNX2-209ENST00000475463 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
PCNX2-209ENST00000475463 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
PCNX2-209ENST00000475463 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
PCNX2-209ENST00000475463 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
PCNX2-209ENST00000475463 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
PCNX2-209ENST00000475463 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
PCNX2-209ENST00000475463 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
PCNX2-209ENST00000475463 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
PCNX2-209ENST00000475463 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
PCNX2-209ENST00000475463 APLP2Q06481 763 aa20.25■□□□□ 0.83
PCNX2-209ENST00000475463 CUL7Q14999 1698 aa20.22■□□□□ 0.83
PCNX2-209ENST00000475463 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
PCNX2-209ENST00000475463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
PCNX2-209ENST00000475463 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
PCNX2-209ENST00000475463 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
PCNX2-209ENST00000475463 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
PCNX2-209ENST00000475463 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
PCNX2-209ENST00000475463 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
PCNX2-209ENST00000475463 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
PCNX2-209ENST00000475463 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
PCNX2-209ENST00000475463 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.8
PCNX2-209ENST00000475463 MAP3K1Q13233 1512 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms