RNA–Protein interactions for RNA: ENST00000475226.1

HBB-203, Transcript of hemoglobin subunit beta, humanhuman

TSL 2

Gene HBB, Length 319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-203ENST00000475226 NISCHQ9Y2I1 1504 aa20.4■□□□□ 0.86
HBB-203ENST00000475226 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
HBB-203ENST00000475226 ABCC9O60706 1549 aa17.55■□□□□ 0.4
HBB-203ENST00000475226 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
HBB-203ENST00000475226 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.32
HBB-203ENST00000475226 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
HBB-203ENST00000475226 NACADO15069 1562 aa16.87■□□□□ 0.29
HBB-203ENST00000475226 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
HBB-203ENST00000475226 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
HBB-203ENST00000475226 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
HBB-203ENST00000475226 SCRIBQ14160 1630 aa16.6■□□□□ 0.25
HBB-203ENST00000475226 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
HBB-203ENST00000475226 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
HBB-203ENST00000475226 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
HBB-203ENST00000475226 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
HBB-203ENST00000475226 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
HBB-203ENST00000475226 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
HBB-203ENST00000475226 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
HBB-203ENST00000475226 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
HBB-203ENST00000475226 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
HBB-203ENST00000475226 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
HBB-203ENST00000475226 WIZO95785 1651 aa15.69■□□□□ 0.1
HBB-203ENST00000475226 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
HBB-203ENST00000475226 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
HBB-203ENST00000475226 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
HBB-203ENST00000475226 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
HBB-203ENST00000475226 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
HBB-203ENST00000475226 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
HBB-203ENST00000475226 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
HBB-203ENST00000475226 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
HBB-203ENST00000475226 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
HBB-203ENST00000475226 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.03
HBB-203ENST00000475226 NESP48681 1621 aa15.26■□□□□ 0.03
HBB-203ENST00000475226 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
HBB-203ENST00000475226 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
HBB-203ENST00000475226 CADPSQ9ULU8 1353 aa15.12■□□□□ 0.01
HBB-203ENST00000475226 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
HBB-203ENST00000475226 CFTRP13569 1480 aa15.08■□□□□ 0
HBB-203ENST00000475226 ERCC6Q03468 1493 aa15.08■□□□□ 0
HBB-203ENST00000475226 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
HBB-203ENST00000475226 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
HBB-203ENST00000475226 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
HBB-203ENST00000475226 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
HBB-203ENST00000475226 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
HBB-203ENST00000475226 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
HBB-203ENST00000475226 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
HBB-203ENST00000475226 WDR62O43379 1518 aa14.82□□□□□ -0.04
HBB-203ENST00000475226 CUX1P39880 1505 aa14.79□□□□□ -0.04
HBB-203ENST00000475226 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
HBB-203ENST00000475226 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
HBB-203ENST00000475226 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
HBB-203ENST00000475226 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
HBB-203ENST00000475226 CUX2O14529 1486 aa14.73□□□□□ -0.05
HBB-203ENST00000475226 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
HBB-203ENST00000475226 FGD5Q6ZNL6 1462 aa14.7□□□□□ -0.06
HBB-203ENST00000475226 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
HBB-203ENST00000475226 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
HBB-203ENST00000475226 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
HBB-203ENST00000475226 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
HBB-203ENST00000475226 SOGA1O94964 1423 aa14.61□□□□□ -0.07
HBB-203ENST00000475226 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
HBB-203ENST00000475226 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
HBB-203ENST00000475226 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
HBB-203ENST00000475226 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
HBB-203ENST00000475226 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
HBB-203ENST00000475226 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
HBB-203ENST00000475226 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
HBB-203ENST00000475226 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
HBB-203ENST00000475226 PBRM1Q86U86 1689 aa14.52□□□□□ -0.09
HBB-203ENST00000475226 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
HBB-203ENST00000475226 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
HBB-203ENST00000475226 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
HBB-203ENST00000475226 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
HBB-203ENST00000475226 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
HBB-203ENST00000475226 SNAPC4Q5SXM2 1469 aa14.41□□□□□ -0.1
HBB-203ENST00000475226 CHD1O14646 1710 aa14.41□□□□□ -0.1
HBB-203ENST00000475226 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
HBB-203ENST00000475226 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
HBB-203ENST00000475226 FBLN2P98095 1184 aa14.38□□□□□ -0.11
HBB-203ENST00000475226 ADAMTS12P58397 1594 aa14.34□□□□□ -0.11
HBB-203ENST00000475226 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
HBB-203ENST00000475226 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
HBB-203ENST00000475226 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
HBB-203ENST00000475226 IGF1RP08069 1367 aa14.3□□□□□ -0.12
HBB-203ENST00000475226 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
HBB-203ENST00000475226 CUL7Q14999 1698 aa14.29□□□□□ -0.12
HBB-203ENST00000475226 SYNJ2O15056 1496 aa14.27□□□□□ -0.12
HBB-203ENST00000475226 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
HBB-203ENST00000475226 CARMIL1Q5VZK9 1371 aa14.24□□□□□ -0.13
HBB-203ENST00000475226 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
HBB-203ENST00000475226 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
HBB-203ENST00000475226 EEA1Q15075 1411 aa14.2□□□□□ -0.14
HBB-203ENST00000475226 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
HBB-203ENST00000475226 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
HBB-203ENST00000475226 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
HBB-203ENST00000475226 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
HBB-203ENST00000475226 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
HBB-203ENST00000475226 KIF21BO75037 1637 aa14.13□□□□□ -0.15
HBB-203ENST00000475226 CLASP1Q7Z460 1538 aa14.13□□□□□ -0.15
HBB-203ENST00000475226 NUP160Q12769 1436 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms