RNA–Protein interactions for RNA: ENST00000475116.1

ERCC6-206, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-206ENST00000475116 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
ERCC6-206ENST00000475116 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
ERCC6-206ENST00000475116 ABCC9O60706 1549 aa19.55■□□□□ 0.72
ERCC6-206ENST00000475116 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
ERCC6-206ENST00000475116 RB1CC1Q8TDY2 1594 aa18.67■□□□□ 0.58
ERCC6-206ENST00000475116 NACADO15069 1562 aa18.6■□□□□ 0.57
ERCC6-206ENST00000475116 ZCCHC6Q5VYS8 1495 aaKnown RBP18.45■□□□□ 0.54
ERCC6-206ENST00000475116 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
ERCC6-206ENST00000475116 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
ERCC6-206ENST00000475116 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
ERCC6-206ENST00000475116 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
ERCC6-206ENST00000475116 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
ERCC6-206ENST00000475116 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
ERCC6-206ENST00000475116 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
ERCC6-206ENST00000475116 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
ERCC6-206ENST00000475116 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
ERCC6-206ENST00000475116 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
ERCC6-206ENST00000475116 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
ERCC6-206ENST00000475116 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
ERCC6-206ENST00000475116 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
ERCC6-206ENST00000475116 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
ERCC6-206ENST00000475116 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
ERCC6-206ENST00000475116 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
ERCC6-206ENST00000475116 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
ERCC6-206ENST00000475116 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
ERCC6-206ENST00000475116 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
ERCC6-206ENST00000475116 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.32
ERCC6-206ENST00000475116 WIZO95785 1651 aa16.92■□□□□ 0.3
ERCC6-206ENST00000475116 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
ERCC6-206ENST00000475116 NESP48681 1621 aa16.87■□□□□ 0.29
ERCC6-206ENST00000475116 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
ERCC6-206ENST00000475116 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
ERCC6-206ENST00000475116 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
ERCC6-206ENST00000475116 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
ERCC6-206ENST00000475116 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
ERCC6-206ENST00000475116 CUX2O14529 1486 aa16.66■□□□□ 0.26
ERCC6-206ENST00000475116 KIF21AQ7Z4S6 1674 aa16.59■□□□□ 0.25
ERCC6-206ENST00000475116 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
ERCC6-206ENST00000475116 CFTRP13569 1480 aa16.57■□□□□ 0.24
ERCC6-206ENST00000475116 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
ERCC6-206ENST00000475116 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
ERCC6-206ENST00000475116 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
ERCC6-206ENST00000475116 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
ERCC6-206ENST00000475116 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
ERCC6-206ENST00000475116 WDR62O43379 1518 aa16.41■□□□□ 0.22
ERCC6-206ENST00000475116 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
ERCC6-206ENST00000475116 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
ERCC6-206ENST00000475116 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
ERCC6-206ENST00000475116 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
ERCC6-206ENST00000475116 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
ERCC6-206ENST00000475116 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
ERCC6-206ENST00000475116 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
ERCC6-206ENST00000475116 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
ERCC6-206ENST00000475116 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
ERCC6-206ENST00000475116 SOGA1O94964 1423 aa16.07■□□□□ 0.16
ERCC6-206ENST00000475116 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
ERCC6-206ENST00000475116 CUX1P39880 1505 aa16.07■□□□□ 0.16
ERCC6-206ENST00000475116 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.16
ERCC6-206ENST00000475116 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
ERCC6-206ENST00000475116 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
ERCC6-206ENST00000475116 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
ERCC6-206ENST00000475116 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
ERCC6-206ENST00000475116 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
ERCC6-206ENST00000475116 FBLN2P98095 1184 aa15.96■□□□□ 0.15
ERCC6-206ENST00000475116 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
ERCC6-206ENST00000475116 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
ERCC6-206ENST00000475116 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
ERCC6-206ENST00000475116 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
ERCC6-206ENST00000475116 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
ERCC6-206ENST00000475116 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
ERCC6-206ENST00000475116 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
ERCC6-206ENST00000475116 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
ERCC6-206ENST00000475116 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
ERCC6-206ENST00000475116 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
ERCC6-206ENST00000475116 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
ERCC6-206ENST00000475116 CHD1O14646 1710 aa15.81■□□□□ 0.12
ERCC6-206ENST00000475116 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
ERCC6-206ENST00000475116 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
ERCC6-206ENST00000475116 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
ERCC6-206ENST00000475116 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
ERCC6-206ENST00000475116 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
ERCC6-206ENST00000475116 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
ERCC6-206ENST00000475116 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
ERCC6-206ENST00000475116 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
ERCC6-206ENST00000475116 CYB5RLQ6IPT4 315 aa15.68■□□□□ 0.1
ERCC6-206ENST00000475116 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
ERCC6-206ENST00000475116 ERICH3Q5RHP9 1530 aa15.65■□□□□ 0.1
ERCC6-206ENST00000475116 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
ERCC6-206ENST00000475116 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
ERCC6-206ENST00000475116 ADAMTS12P58397 1594 aa15.64■□□□□ 0.09
ERCC6-206ENST00000475116 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
ERCC6-206ENST00000475116 IGF1RP08069 1367 aa15.6■□□□□ 0.09
ERCC6-206ENST00000475116 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
ERCC6-206ENST00000475116 NUP160Q12769 1436 aa15.57■□□□□ 0.08
ERCC6-206ENST00000475116 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
ERCC6-206ENST00000475116 CARMIL1Q5VZK9 1371 aa15.5■□□□□ 0.07
ERCC6-206ENST00000475116 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
ERCC6-206ENST00000475116 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
ERCC6-206ENST00000475116 ERCC6L2Q5T890 1561 aa15.47■□□□□ 0.07
ERCC6-206ENST00000475116 CUL7Q14999 1698 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms