RNA–Protein interactions for RNA: ENST00000475104.1

SPEG-217, Transcript of SPEG complex locus, humanhuman

TSL 2

Gene SPEG, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-217ENST00000475104 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
SPEG-217ENST00000475104 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
SPEG-217ENST00000475104 ABCC9O60706 1549 aa29.84■■■□□ 2.37
SPEG-217ENST00000475104 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
SPEG-217ENST00000475104 DCAF8L2P0C7V8 631 aa29.21■■■□□ 2.27
SPEG-217ENST00000475104 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
SPEG-217ENST00000475104 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
SPEG-217ENST00000475104 NACADO15069 1562 aa28.93■■■□□ 2.22
SPEG-217ENST00000475104 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
SPEG-217ENST00000475104 SCRIBQ14160 1630 aa28.27■■■□□ 2.12
SPEG-217ENST00000475104 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.09
SPEG-217ENST00000475104 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
SPEG-217ENST00000475104 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
SPEG-217ENST00000475104 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
SPEG-217ENST00000475104 CECR2Q9BXF3 1484 aa27.31■■□□□ 1.96
SPEG-217ENST00000475104 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
SPEG-217ENST00000475104 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
SPEG-217ENST00000475104 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
SPEG-217ENST00000475104 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
SPEG-217ENST00000475104 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
SPEG-217ENST00000475104 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
SPEG-217ENST00000475104 CC2D2AQ9P2K1 1620 aa26.93■■□□□ 1.9
SPEG-217ENST00000475104 ATAD2BQ9ULI0 1458 aa26.86■■□□□ 1.89
SPEG-217ENST00000475104 SMARCA2P51531 1590 aa26.79■■□□□ 1.88
SPEG-217ENST00000475104 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
SPEG-217ENST00000475104 NCAPD3P42695 1498 aa26.75■■□□□ 1.87
SPEG-217ENST00000475104 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
SPEG-217ENST00000475104 WIZO95785 1651 aa26.71■■□□□ 1.87
SPEG-217ENST00000475104 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
SPEG-217ENST00000475104 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SPEG-217ENST00000475104 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
SPEG-217ENST00000475104 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
SPEG-217ENST00000475104 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
SPEG-217ENST00000475104 CFTRP13569 1480 aa25.96■■□□□ 1.75
SPEG-217ENST00000475104 NESP48681 1621 aa25.96■■□□□ 1.75
SPEG-217ENST00000475104 LAMC3Q9Y6N6 1575 aa25.89■■□□□ 1.73
SPEG-217ENST00000475104 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
SPEG-217ENST00000475104 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
SPEG-217ENST00000475104 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
SPEG-217ENST00000475104 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
SPEG-217ENST00000475104 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
SPEG-217ENST00000475104 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
SPEG-217ENST00000475104 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
SPEG-217ENST00000475104 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
SPEG-217ENST00000475104 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
SPEG-217ENST00000475104 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
SPEG-217ENST00000475104 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
SPEG-217ENST00000475104 WDR62O43379 1518 aa25.34■■□□□ 1.65
SPEG-217ENST00000475104 CUX1P39880 1505 aa25.34■■□□□ 1.65
SPEG-217ENST00000475104 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
SPEG-217ENST00000475104 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
SPEG-217ENST00000475104 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
SPEG-217ENST00000475104 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
SPEG-217ENST00000475104 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
SPEG-217ENST00000475104 TOP2BQ02880 1626 aa25.21■■□□□ 1.63
SPEG-217ENST00000475104 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
SPEG-217ENST00000475104 CUX2O14529 1486 aa25.18■■□□□ 1.62
SPEG-217ENST00000475104 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
SPEG-217ENST00000475104 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
SPEG-217ENST00000475104 SOGA1O94964 1423 aa25.11■■□□□ 1.61
SPEG-217ENST00000475104 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
SPEG-217ENST00000475104 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
SPEG-217ENST00000475104 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
SPEG-217ENST00000475104 TARBP1Q13395 1621 aaKnown RBP24.96■■□□□ 1.59
SPEG-217ENST00000475104 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
SPEG-217ENST00000475104 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
SPEG-217ENST00000475104 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
SPEG-217ENST00000475104 KIF27Q86VH2 1401 aa24.84■■□□□ 1.57
SPEG-217ENST00000475104 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
SPEG-217ENST00000475104 GAPVD1Q14C86 1478 aa24.8■■□□□ 1.56
SPEG-217ENST00000475104 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
SPEG-217ENST00000475104 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
SPEG-217ENST00000475104 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
SPEG-217ENST00000475104 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
SPEG-217ENST00000475104 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
SPEG-217ENST00000475104 EEA1Q15075 1411 aa24.69■■□□□ 1.54
SPEG-217ENST00000475104 IGF1RP08069 1367 aa24.69■■□□□ 1.54
SPEG-217ENST00000475104 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
SPEG-217ENST00000475104 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
SPEG-217ENST00000475104 CSRNP3Q8WYN3 585 aa24.63■■□□□ 1.53
SPEG-217ENST00000475104 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
SPEG-217ENST00000475104 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
SPEG-217ENST00000475104 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
SPEG-217ENST00000475104 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
SPEG-217ENST00000475104 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
SPEG-217ENST00000475104 FBLN2P98095 1184 aa24.51■■□□□ 1.51
SPEG-217ENST00000475104 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
SPEG-217ENST00000475104 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
SPEG-217ENST00000475104 PRXQ9BXM0 1461 aa24.49■■□□□ 1.51
SPEG-217ENST00000475104 CUL7Q14999 1698 aa24.46■■□□□ 1.51
SPEG-217ENST00000475104 RAPGEF2Q9Y4G8 1499 aa24.44■■□□□ 1.5
SPEG-217ENST00000475104 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
SPEG-217ENST00000475104 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
SPEG-217ENST00000475104 KIF21BO75037 1637 aa24.32■■□□□ 1.48
SPEG-217ENST00000475104 GOLGA3Q08378 1498 aa24.31■■□□□ 1.48
SPEG-217ENST00000475104 NUP160Q12769 1436 aa24.28■■□□□ 1.48
SPEG-217ENST00000475104 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
SPEG-217ENST00000475104 CHD1O14646 1710 aa24.27■■□□□ 1.48
SPEG-217ENST00000475104 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
SPEG-217ENST00000475104 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms