RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 NISCHQ9Y2I1 1504 aa19.3■□□□□ 0.68
HPS1-210ENST00000474873 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
HPS1-210ENST00000474873 ABCC9O60706 1549 aa16.68■□□□□ 0.26
HPS1-210ENST00000474873 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
HPS1-210ENST00000474873 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
HPS1-210ENST00000474873 NACADO15069 1562 aa16.1■□□□□ 0.17
HPS1-210ENST00000474873 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
HPS1-210ENST00000474873 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
HPS1-210ENST00000474873 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
HPS1-210ENST00000474873 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
HPS1-210ENST00000474873 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
HPS1-210ENST00000474873 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
HPS1-210ENST00000474873 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
HPS1-210ENST00000474873 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
HPS1-210ENST00000474873 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.09
HPS1-210ENST00000474873 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
HPS1-210ENST00000474873 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
HPS1-210ENST00000474873 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0
HPS1-210ENST00000474873 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
HPS1-210ENST00000474873 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
HPS1-210ENST00000474873 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
HPS1-210ENST00000474873 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
HPS1-210ENST00000474873 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
HPS1-210ENST00000474873 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
HPS1-210ENST00000474873 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
HPS1-210ENST00000474873 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
HPS1-210ENST00000474873 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
HPS1-210ENST00000474873 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
HPS1-210ENST00000474873 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
HPS1-210ENST00000474873 WIZO95785 1651 aa14.68□□□□□ -0.06
HPS1-210ENST00000474873 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
HPS1-210ENST00000474873 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
HPS1-210ENST00000474873 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
HPS1-210ENST00000474873 NESP48681 1621 aa14.44□□□□□ -0.1
HPS1-210ENST00000474873 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
HPS1-210ENST00000474873 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
HPS1-210ENST00000474873 CUX2O14529 1486 aa14.42□□□□□ -0.1
HPS1-210ENST00000474873 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
HPS1-210ENST00000474873 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
HPS1-210ENST00000474873 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
HPS1-210ENST00000474873 CFTRP13569 1480 aa14.37□□□□□ -0.11
HPS1-210ENST00000474873 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
HPS1-210ENST00000474873 KIF21AQ7Z4S6 1674 aa14.24□□□□□ -0.13
HPS1-210ENST00000474873 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
HPS1-210ENST00000474873 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
HPS1-210ENST00000474873 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
HPS1-210ENST00000474873 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
HPS1-210ENST00000474873 WDR62O43379 1518 aa14.13□□□□□ -0.15
HPS1-210ENST00000474873 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
HPS1-210ENST00000474873 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
HPS1-210ENST00000474873 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
HPS1-210ENST00000474873 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
HPS1-210ENST00000474873 AEBP2Q6ZN18 517 aaPredicted RBP13.97□□□□□ -0.17
HPS1-210ENST00000474873 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
HPS1-210ENST00000474873 CUX1P39880 1505 aa13.94□□□□□ -0.18
HPS1-210ENST00000474873 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
HPS1-210ENST00000474873 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
HPS1-210ENST00000474873 SOGA1O94964 1423 aa13.89□□□□□ -0.19
HPS1-210ENST00000474873 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
HPS1-210ENST00000474873 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
HPS1-210ENST00000474873 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
HPS1-210ENST00000474873 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
HPS1-210ENST00000474873 TOP2BQ02880 1626 aa13.84□□□□□ -0.19
HPS1-210ENST00000474873 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
HPS1-210ENST00000474873 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
HPS1-210ENST00000474873 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.22e-7■■■□□ 15
HPS1-210ENST00000474873 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
HPS1-210ENST00000474873 WDR97A6NE52 1622 aa13.77□□□□□ -0.21
HPS1-210ENST00000474873 EIF4G3O43432 1585 aaKnown RBP13.77□□□□□ -0.21
HPS1-210ENST00000474873 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.21
HPS1-210ENST00000474873 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
HPS1-210ENST00000474873 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
HPS1-210ENST00000474873 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
HPS1-210ENST00000474873 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
HPS1-210ENST00000474873 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
HPS1-210ENST00000474873 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
HPS1-210ENST00000474873 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
HPS1-210ENST00000474873 FBLN2P98095 1184 aa13.63□□□□□ -0.23
HPS1-210ENST00000474873 CHMP7Q8WUX9 453 aaPredicted RBP13.63□□□□□ -0.23
HPS1-210ENST00000474873 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
HPS1-210ENST00000474873 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
HPS1-210ENST00000474873 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
HPS1-210ENST00000474873 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
HPS1-210ENST00000474873 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
HPS1-210ENST00000474873 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
HPS1-210ENST00000474873 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
HPS1-210ENST00000474873 IGF1RP08069 1367 aa13.57□□□□□ -0.24
HPS1-210ENST00000474873 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
HPS1-210ENST00000474873 CHD1O14646 1710 aa13.56□□□□□ -0.24
HPS1-210ENST00000474873 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
HPS1-210ENST00000474873 CHIC1Q5VXU3 224 aa13.53□□□□□ -0.24
HPS1-210ENST00000474873 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
HPS1-210ENST00000474873 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
HPS1-210ENST00000474873 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
HPS1-210ENST00000474873 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
HPS1-210ENST00000474873 CUL7Q14999 1698 aa13.47□□□□□ -0.25
HPS1-210ENST00000474873 NUP160Q12769 1436 aa13.47□□□□□ -0.25
HPS1-210ENST00000474873 CLASP1Q7Z460 1538 aa13.45□□□□□ -0.26
HPS1-210ENST00000474873 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
HPS1-210ENST00000474873 EEA1Q15075 1411 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms