RNA–Protein interactions for RNA: ENST00000474596.5

TMPRSS3-205, Transcript of transmembrane serine protease 3, humanhuman

TSL 1 (best)

Gene TMPRSS3, Length 2,105 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-205ENST00000474596 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
TMPRSS3-205ENST00000474596 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
TMPRSS3-205ENST00000474596 ABCC9O60706 1549 aa29.82■■■□□ 2.36
TMPRSS3-205ENST00000474596 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
TMPRSS3-205ENST00000474596 ZCCHC6Q5VYS8 1495 aaKnown RBP29.46■■■□□ 2.31
TMPRSS3-205ENST00000474596 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
TMPRSS3-205ENST00000474596 NACADO15069 1562 aa28.82■■■□□ 2.2
TMPRSS3-205ENST00000474596 SHROOM4Q9ULL8 1493 aa28.79■■■□□ 2.2
TMPRSS3-205ENST00000474596 MYO15BQ96JP2 1530 aa28.78■■■□□ 2.2
TMPRSS3-205ENST00000474596 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.19
TMPRSS3-205ENST00000474596 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
TMPRSS3-205ENST00000474596 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
TMPRSS3-205ENST00000474596 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
TMPRSS3-205ENST00000474596 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
TMPRSS3-205ENST00000474596 SUPT5HO00267 1087 aaKnown RBP27.55■■■□□ 2
TMPRSS3-205ENST00000474596 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
TMPRSS3-205ENST00000474596 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
TMPRSS3-205ENST00000474596 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
TMPRSS3-205ENST00000474596 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.95
TMPRSS3-205ENST00000474596 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
TMPRSS3-205ENST00000474596 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.93
TMPRSS3-205ENST00000474596 WIZO95785 1651 aa26.95■■□□□ 1.9
TMPRSS3-205ENST00000474596 ATAD2BQ9ULI0 1458 aa26.89■■□□□ 1.9
TMPRSS3-205ENST00000474596 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.88
TMPRSS3-205ENST00000474596 CC2D2AQ9P2K1 1620 aa26.8■■□□□ 1.88
TMPRSS3-205ENST00000474596 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
TMPRSS3-205ENST00000474596 BAZ1BQ9UIG0 1483 aaKnown RBP26.73■■□□□ 1.87
TMPRSS3-205ENST00000474596 PEG3Q9GZU2 1588 aa26.72■■□□□ 1.87
TMPRSS3-205ENST00000474596 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
TMPRSS3-205ENST00000474596 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
TMPRSS3-205ENST00000474596 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
TMPRSS3-205ENST00000474596 CCDC88BA6NC98 1476 aa26.48■■□□□ 1.83
TMPRSS3-205ENST00000474596 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
TMPRSS3-205ENST00000474596 NESP48681 1621 aa26.01■■□□□ 1.75
TMPRSS3-205ENST00000474596 CFTRP13569 1480 aa26■■□□□ 1.75
TMPRSS3-205ENST00000474596 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
TMPRSS3-205ENST00000474596 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
TMPRSS3-205ENST00000474596 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
TMPRSS3-205ENST00000474596 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
TMPRSS3-205ENST00000474596 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
TMPRSS3-205ENST00000474596 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
TMPRSS3-205ENST00000474596 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
TMPRSS3-205ENST00000474596 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
TMPRSS3-205ENST00000474596 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
TMPRSS3-205ENST00000474596 FAM9AQ8IZU1 332 aaPredicted RBP25.49■■□□□ 1.67
TMPRSS3-205ENST00000474596 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
TMPRSS3-205ENST00000474596 CUX1P39880 1505 aa25.49■■□□□ 1.67
TMPRSS3-205ENST00000474596 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
TMPRSS3-205ENST00000474596 KIF21AQ7Z4S6 1674 aa25.46■■□□□ 1.67
TMPRSS3-205ENST00000474596 URB2Q14146 1524 aaKnown RBP25.43■■□□□ 1.66
TMPRSS3-205ENST00000474596 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
TMPRSS3-205ENST00000474596 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
TMPRSS3-205ENST00000474596 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
TMPRSS3-205ENST00000474596 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
TMPRSS3-205ENST00000474596 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
TMPRSS3-205ENST00000474596 SOGA1O94964 1423 aa25.3■■□□□ 1.64
TMPRSS3-205ENST00000474596 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
TMPRSS3-205ENST00000474596 POLA1P09884 1462 aaPredicted RBP25.26■■□□□ 1.63
TMPRSS3-205ENST00000474596 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
TMPRSS3-205ENST00000474596 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
TMPRSS3-205ENST00000474596 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
TMPRSS3-205ENST00000474596 WDR62O43379 1518 aa25.18■■□□□ 1.62
TMPRSS3-205ENST00000474596 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
TMPRSS3-205ENST00000474596 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
TMPRSS3-205ENST00000474596 CUX2O14529 1486 aa25.13■■□□□ 1.61
TMPRSS3-205ENST00000474596 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
TMPRSS3-205ENST00000474596 CSRNP3Q8WYN3 585 aa25.12■■□□□ 1.61
TMPRSS3-205ENST00000474596 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
TMPRSS3-205ENST00000474596 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
TMPRSS3-205ENST00000474596 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.59
TMPRSS3-205ENST00000474596 IFT140Q96RY7 1462 aa25■■□□□ 1.59
TMPRSS3-205ENST00000474596 EEA1Q15075 1411 aa24.98■■□□□ 1.59
TMPRSS3-205ENST00000474596 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
TMPRSS3-205ENST00000474596 IGF1RP08069 1367 aa24.95■■□□□ 1.59
TMPRSS3-205ENST00000474596 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
TMPRSS3-205ENST00000474596 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
TMPRSS3-205ENST00000474596 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
TMPRSS3-205ENST00000474596 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
TMPRSS3-205ENST00000474596 FBLN2P98095 1184 aa24.78■■□□□ 1.56
TMPRSS3-205ENST00000474596 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
TMPRSS3-205ENST00000474596 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
TMPRSS3-205ENST00000474596 RAPGEF2Q9Y4G8 1499 aa24.75■■□□□ 1.55
TMPRSS3-205ENST00000474596 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
TMPRSS3-205ENST00000474596 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
TMPRSS3-205ENST00000474596 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
TMPRSS3-205ENST00000474596 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
TMPRSS3-205ENST00000474596 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
TMPRSS3-205ENST00000474596 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
TMPRSS3-205ENST00000474596 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
TMPRSS3-205ENST00000474596 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
TMPRSS3-205ENST00000474596 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
TMPRSS3-205ENST00000474596 KIF21BO75037 1637 aa24.58■■□□□ 1.53
TMPRSS3-205ENST00000474596 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
TMPRSS3-205ENST00000474596 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
TMPRSS3-205ENST00000474596 MAGI1Q96QZ7 1491 aaPredicted RBP24.53■■□□□ 1.52
TMPRSS3-205ENST00000474596 CUL7Q14999 1698 aa24.52■■□□□ 1.52
TMPRSS3-205ENST00000474596 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
TMPRSS3-205ENST00000474596 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
TMPRSS3-205ENST00000474596 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
TMPRSS3-205ENST00000474596 CEP162Q5TB80 1403 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms