RNA–Protein interactions for RNA: ENST00000474593.1

KHDC1-204, Transcript of KH domain containing 1, humanhuman

TSL 5

Gene KHDC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-204ENST00000474593 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
KHDC1-204ENST00000474593 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
KHDC1-204ENST00000474593 ABCC9O60706 1549 aa12.57□□□□□ -0.4
KHDC1-204ENST00000474593 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
KHDC1-204ENST00000474593 RB1CC1Q8TDY2 1594 aa12.02□□□□□ -0.49
KHDC1-204ENST00000474593 NACADO15069 1562 aa11.99□□□□□ -0.49
KHDC1-204ENST00000474593 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
KHDC1-204ENST00000474593 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
KHDC1-204ENST00000474593 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
KHDC1-204ENST00000474593 DCAF1Q9Y4B6 1507 aa11.8□□□□□ -0.52
KHDC1-204ENST00000474593 SCRIBQ14160 1630 aa11.64□□□□□ -0.55
KHDC1-204ENST00000474593 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
KHDC1-204ENST00000474593 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
KHDC1-204ENST00000474593 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.56
KHDC1-204ENST00000474593 SHROOM4Q9ULL8 1493 aa11.46□□□□□ -0.57
KHDC1-204ENST00000474593 EIF4G1Q04637 1599 aaKnown RBP11.32□□□□□ -0.6
KHDC1-204ENST00000474593 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
KHDC1-204ENST00000474593 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
KHDC1-204ENST00000474593 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
KHDC1-204ENST00000474593 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
KHDC1-204ENST00000474593 NCAPD3P42695 1498 aa11.08□□□□□ -0.64
KHDC1-204ENST00000474593 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
KHDC1-204ENST00000474593 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
KHDC1-204ENST00000474593 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
KHDC1-204ENST00000474593 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
KHDC1-204ENST00000474593 HMGXB3Q12766 1538 aa10.95□□□□□ -0.66
KHDC1-204ENST00000474593 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
KHDC1-204ENST00000474593 PEG3Q9GZU2 1588 aa10.94□□□□□ -0.66
KHDC1-204ENST00000474593 WIZO95785 1651 aa10.92□□□□□ -0.66
KHDC1-204ENST00000474593 ERCC6Q03468 1493 aa10.88□□□□□ -0.67
KHDC1-204ENST00000474593 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
KHDC1-204ENST00000474593 NESP48681 1621 aa10.83□□□□□ -0.68
KHDC1-204ENST00000474593 CADPSQ9ULU8 1353 aa10.81□□□□□ -0.68
KHDC1-204ENST00000474593 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
KHDC1-204ENST00000474593 TOP2AP11388 1531 aaKnown RBP10.78□□□□□ -0.68
KHDC1-204ENST00000474593 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
KHDC1-204ENST00000474593 CCDC88BA6NC98 1476 aa10.73□□□□□ -0.69
KHDC1-204ENST00000474593 CFTRP13569 1480 aa10.68□□□□□ -0.7
KHDC1-204ENST00000474593 CUX2O14529 1486 aa10.68□□□□□ -0.7
KHDC1-204ENST00000474593 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
KHDC1-204ENST00000474593 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
KHDC1-204ENST00000474593 KIF21AQ7Z4S6 1674 aa10.63□□□□□ -0.71
KHDC1-204ENST00000474593 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
KHDC1-204ENST00000474593 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
KHDC1-204ENST00000474593 WDR62O43379 1518 aa10.52□□□□□ -0.73
KHDC1-204ENST00000474593 URB2Q14146 1524 aaKnown RBP10.51□□□□□ -0.73
KHDC1-204ENST00000474593 ABCC8Q09428 1581 aa10.51□□□□□ -0.73
KHDC1-204ENST00000474593 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
KHDC1-204ENST00000474593 PRDM2Q13029 1718 aa10.49□□□□□ -0.73
KHDC1-204ENST00000474593 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
KHDC1-204ENST00000474593 SOGA1O94964 1423 aa10.42□□□□□ -0.74
KHDC1-204ENST00000474593 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
KHDC1-204ENST00000474593 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
KHDC1-204ENST00000474593 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
KHDC1-204ENST00000474593 FBLN2P98095 1184 aa10.4□□□□□ -0.74
KHDC1-204ENST00000474593 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
KHDC1-204ENST00000474593 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
KHDC1-204ENST00000474593 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
KHDC1-204ENST00000474593 ZNF608Q9ULD9 1512 aaPredicted RBP10.36□□□□□ -0.75
KHDC1-204ENST00000474593 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
KHDC1-204ENST00000474593 CUX1P39880 1505 aa10.35□□□□□ -0.75
KHDC1-204ENST00000474593 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
KHDC1-204ENST00000474593 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
KHDC1-204ENST00000474593 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
KHDC1-204ENST00000474593 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
KHDC1-204ENST00000474593 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
KHDC1-204ENST00000474593 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
KHDC1-204ENST00000474593 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
KHDC1-204ENST00000474593 GRIN2BQ13224 1484 aa10.24□□□□□ -0.77
KHDC1-204ENST00000474593 TOP2BQ02880 1626 aa10.24□□□□□ -0.77
KHDC1-204ENST00000474593 SYNJ1O43426 1573 aa10.23□□□□□ -0.77
KHDC1-204ENST00000474593 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
KHDC1-204ENST00000474593 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
KHDC1-204ENST00000474593 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
KHDC1-204ENST00000474593 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
KHDC1-204ENST00000474593 MAGI1Q96QZ7 1491 aaPredicted RBP10.19□□□□□ -0.78
KHDC1-204ENST00000474593 CYB5RLQ6IPT4 315 aa10.17□□□□□ -0.78
KHDC1-204ENST00000474593 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
KHDC1-204ENST00000474593 KIF27Q86VH2 1401 aa10.16□□□□□ -0.78
KHDC1-204ENST00000474593 CHD1O14646 1710 aa10.13□□□□□ -0.79
KHDC1-204ENST00000474593 FHAD1B1AJZ9 1412 aa10.13□□□□□ -0.79
KHDC1-204ENST00000474593 IGF1RP08069 1367 aa10.13□□□□□ -0.79
KHDC1-204ENST00000474593 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
KHDC1-204ENST00000474593 ABCA5Q8WWZ7 1642 aa10.12□□□□□ -0.79
KHDC1-204ENST00000474593 ERICH3Q5RHP9 1530 aa10.11□□□□□ -0.79
KHDC1-204ENST00000474593 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
KHDC1-204ENST00000474593 GRIN2AQ12879 1464 aa10.09□□□□□ -0.79
KHDC1-204ENST00000474593 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
KHDC1-204ENST00000474593 FAM9AQ8IZU1 332 aaPredicted RBP10.06□□□□□ -0.8
KHDC1-204ENST00000474593 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
KHDC1-204ENST00000474593 RIMBP3CA6NJZ7 1639 aa10.05□□□□□ -0.8
KHDC1-204ENST00000474593 RIMBP3BA6NNM3 1639 aa10.05□□□□□ -0.8
KHDC1-204ENST00000474593 RIMBP3Q9UFD9 1639 aa10.05□□□□□ -0.8
KHDC1-204ENST00000474593 ADAMTS12P58397 1594 aa10.04□□□□□ -0.8
KHDC1-204ENST00000474593 CHIC1Q5VXU3 224 aa10.03□□□□□ -0.8
KHDC1-204ENST00000474593 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
KHDC1-204ENST00000474593 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
KHDC1-204ENST00000474593 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.81
KHDC1-204ENST00000474593 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.81
KHDC1-204ENST00000474593 NUP160Q12769 1436 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms