RNA–Protein interactions for RNA: ENST00000474438.1

CDH22-202, Transcript of cadherin 22, humanhuman

TSL 1 (best)

Gene CDH22, Length 1,640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22-202ENST00000474438 NISCHQ9Y2I1 1504 aa51.87■■■■■ 5.89
CDH22-202ENST00000474438 CCDC180Q9P1Z9 1646 aa45.47■■■■■ 4.87
CDH22-202ENST00000474438 ABCC9O60706 1549 aa43.54■■■■■ 4.56
CDH22-202ENST00000474438 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
CDH22-202ENST00000474438 DCAF8L2P0C7V8 631 aa43.08■■■■■ 4.49
CDH22-202ENST00000474438 DCAF1Q9Y4B6 1507 aa42.92■■■■■ 4.46
CDH22-202ENST00000474438 MYO15BQ96JP2 1530 aa42.66■■■■■ 4.42
CDH22-202ENST00000474438 NACADO15069 1562 aa42.55■■■■■ 4.4
CDH22-202ENST00000474438 RB1CC1Q8TDY2 1594 aa42.31■■■■■ 4.36
CDH22-202ENST00000474438 SHROOM4Q9ULL8 1493 aa41.84■■■■■ 4.29
CDH22-202ENST00000474438 SCRIBQ14160 1630 aa41.69■■■■■ 4.26
CDH22-202ENST00000474438 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
CDH22-202ENST00000474438 BICRAQ9NZM4 1560 aa40.99■■■■■ 4.15
CDH22-202ENST00000474438 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
CDH22-202ENST00000474438 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
CDH22-202ENST00000474438 BAZ1AQ9NRL2 1556 aaPredicted RBP40.1■■■■■ 4.01
CDH22-202ENST00000474438 RSF1Q96T23 1441 aaPredicted RBP40.02■■■■■ 4
CDH22-202ENST00000474438 MROH2BQ7Z745 1585 aa40.02■■■■■ 4
CDH22-202ENST00000474438 SUPT5HO00267 1087 aaKnown RBP40.02■■■■■ 4
CDH22-202ENST00000474438 SMARCA4P51532 1647 aa39.95■■■■□ 3.99
CDH22-202ENST00000474438 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.97
CDH22-202ENST00000474438 WIZO95785 1651 aa39.62■■■■□ 3.93
CDH22-202ENST00000474438 PEG3Q9GZU2 1588 aa39.53■■■■□ 3.92
CDH22-202ENST00000474438 ATAD2BQ9ULI0 1458 aa39.5■■■■□ 3.91
CDH22-202ENST00000474438 SMARCA2P51531 1590 aa39.47■■■■□ 3.91
CDH22-202ENST00000474438 CC2D2AQ9P2K1 1620 aa39.38■■■■□ 3.89
CDH22-202ENST00000474438 NCAPD3P42695 1498 aa39.3■■■■□ 3.88
CDH22-202ENST00000474438 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
CDH22-202ENST00000474438 BAZ1BQ9UIG0 1483 aaKnown RBP39.24■■■■□ 3.87
CDH22-202ENST00000474438 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
CDH22-202ENST00000474438 DNAJC5BQ9UF47 199 aa38.98■■■■□ 3.83
CDH22-202ENST00000474438 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
CDH22-202ENST00000474438 CADPSQ9ULU8 1353 aa38.25■■■■□ 3.71
CDH22-202ENST00000474438 CFTRP13569 1480 aa38.24■■■■□ 3.71
CDH22-202ENST00000474438 LAMC3Q9Y6N6 1575 aa38.03■■■■□ 3.68
CDH22-202ENST00000474438 NESP48681 1621 aa38.02■■■■□ 3.68
CDH22-202ENST00000474438 CHIC1Q5VXU3 224 aa38.01■■■■□ 3.68
CDH22-202ENST00000474438 PRDM2Q13029 1718 aa37.88■■■■□ 3.65
CDH22-202ENST00000474438 PDS5BQ9NTI5 1447 aa37.8■■■■□ 3.64
CDH22-202ENST00000474438 FANCD2Q9BXW9 1451 aa37.79■■■■□ 3.64
CDH22-202ENST00000474438 ABCC8Q09428 1581 aa37.77■■■■□ 3.64
CDH22-202ENST00000474438 TRIM41Q8WV44 630 aa37.72■■■■□ 3.63
CDH22-202ENST00000474438 WRNQ14191 1432 aaPredicted RBP eCLIP37.69■■■■□ 3.62
CDH22-202ENST00000474438 CEP164Q9UPV0 1460 aa37.61■■■■□ 3.61
CDH22-202ENST00000474438 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
CDH22-202ENST00000474438 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
CDH22-202ENST00000474438 CUX1P39880 1505 aa37.46■■■■□ 3.59
CDH22-202ENST00000474438 ERCC6Q03468 1493 aa37.42■■■■□ 3.58
CDH22-202ENST00000474438 TOP2BQ02880 1626 aa37.42■■■■□ 3.58
CDH22-202ENST00000474438 BIVM-ERCC5R4GMW8 1640 aa37.37■■■■□ 3.57
CDH22-202ENST00000474438 URB2Q14146 1524 aaKnown RBP37.33■■■■□ 3.57
CDH22-202ENST00000474438 DNMBPQ6XZF7 1577 aa37.32■■■■□ 3.56
CDH22-202ENST00000474438 MRC2Q9UBG0 1479 aa37.3■■■■□ 3.56
CDH22-202ENST00000474438 TOPBP1Q92547 1522 aa37.3■■■■□ 3.56
CDH22-202ENST00000474438 FGD5Q6ZNL6 1462 aa37.15■■■■□ 3.54
CDH22-202ENST00000474438 WDR62O43379 1518 aa37.1■■■■□ 3.53
CDH22-202ENST00000474438 THOC2Q8NI27 1593 aaKnown RBP37.08■■■■□ 3.53
CDH22-202ENST00000474438 POLA1P09884 1462 aaPredicted RBP37.07■■■■□ 3.52
CDH22-202ENST00000474438 SOGA1O94964 1423 aa37■■■■□ 3.51
CDH22-202ENST00000474438 FAM9AQ8IZU1 332 aaPredicted RBP36.95■■■■□ 3.51
CDH22-202ENST00000474438 RAD54L2Q9Y4B4 1467 aa36.94■■■■□ 3.5
CDH22-202ENST00000474438 RUSC2Q8N2Y8 1516 aa36.87■■■■□ 3.49
CDH22-202ENST00000474438 EEA1Q15075 1411 aa36.87■■■■□ 3.49
CDH22-202ENST00000474438 CUX2O14529 1486 aa36.85■■■■□ 3.49
CDH22-202ENST00000474438 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
CDH22-202ENST00000474438 KIF27Q86VH2 1401 aa36.81■■■■□ 3.48
CDH22-202ENST00000474438 IFT140Q96RY7 1462 aa36.77■■■■□ 3.48
CDH22-202ENST00000474438 TARBP1Q13395 1621 aaKnown RBP36.76■■■■□ 3.48
CDH22-202ENST00000474438 CSRNP3Q8WYN3 585 aa36.75■■■■□ 3.47
CDH22-202ENST00000474438 WDR97A6NE52 1622 aa36.68■■■■□ 3.46
CDH22-202ENST00000474438 TDRD9Q8NDG6 1382 aaKnown RBP36.67■■■■□ 3.46
CDH22-202ENST00000474438 IGF1RP08069 1367 aa36.56■■■■□ 3.44
CDH22-202ENST00000474438 GAPVD1Q14C86 1478 aa36.56■■■■□ 3.44
CDH22-202ENST00000474438 ZNF608Q9ULD9 1512 aaPredicted RBP36.54■■■■□ 3.44
CDH22-202ENST00000474438 ABCA5Q8WWZ7 1642 aa36.53■■■■□ 3.44
CDH22-202ENST00000474438 AQRO60306 1485 aaKnown RBP eCLIP36.52■■■■□ 3.44
CDH22-202ENST00000474438 LOC105371045A0A1W2PR82 267 aa36.52■■■■□ 3.44
CDH22-202ENST00000474438 EHMT2Q96KQ7 1210 aa36.41■■■■□ 3.42
CDH22-202ENST00000474438 ERICH3Q5RHP9 1530 aa36.4■■■■□ 3.42
CDH22-202ENST00000474438 PRXQ9BXM0 1461 aa36.39■■■■□ 3.42
CDH22-202ENST00000474438 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
CDH22-202ENST00000474438 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
CDH22-202ENST00000474438 CARMIL1Q5VZK9 1371 aa36.36■■■■□ 3.41
CDH22-202ENST00000474438 KIF21BO75037 1637 aa36.34■■■■□ 3.41
CDH22-202ENST00000474438 GOLGA3Q08378 1498 aa36.29■■■■□ 3.4
CDH22-202ENST00000474438 PBRM1Q86U86 1689 aa36.29■■■■□ 3.4
CDH22-202ENST00000474438 CUL7Q14999 1698 aa36.26■■■■□ 3.39
CDH22-202ENST00000474438 RAPGEF2Q9Y4G8 1499 aa36.26■■■■□ 3.39
CDH22-202ENST00000474438 UBTFP17480 764 aaKnown RBP36.21■■■■□ 3.39
CDH22-202ENST00000474438 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
CDH22-202ENST00000474438 SNAPC4Q5SXM2 1469 aa36.16■■■■□ 3.38
CDH22-202ENST00000474438 MAGI1Q96QZ7 1491 aaPredicted RBP36.12■■■■□ 3.37
CDH22-202ENST00000474438 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
CDH22-202ENST00000474438 TNIKQ9UKE5 1360 aa36.1■■■■□ 3.37
CDH22-202ENST00000474438 SYNJ2O15056 1496 aa35.99■■■■□ 3.35
CDH22-202ENST00000474438 CHMP7Q8WUX9 453 aaPredicted RBP35.98■■■■□ 3.35
CDH22-202ENST00000474438 FBLN2P98095 1184 aa35.93■■■■□ 3.34
CDH22-202ENST00000474438 GRIN2AQ12879 1464 aa35.9■■■■□ 3.34
CDH22-202ENST00000474438 CEP162Q5TB80 1403 aa35.81■■■■□ 3.32
CDH22-202ENST00000474438 RANGAP1P46060 587 aaPredicted RBP35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms