RNA–Protein interactions for RNA: ENST00000474386.1

DENND4B-206, Transcript of DENN domain containing 4B, humanhuman

TSL 3

Gene DENND4B, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-206ENST00000474386 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
DENND4B-206ENST00000474386 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
DENND4B-206ENST00000474386 ABCC9O60706 1549 aa24.48■■□□□ 1.51
DENND4B-206ENST00000474386 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
DENND4B-206ENST00000474386 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
DENND4B-206ENST00000474386 NACADO15069 1562 aa23.44■■□□□ 1.34
DENND4B-206ENST00000474386 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
DENND4B-206ENST00000474386 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
DENND4B-206ENST00000474386 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
DENND4B-206ENST00000474386 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
DENND4B-206ENST00000474386 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
DENND4B-206ENST00000474386 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
DENND4B-206ENST00000474386 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
DENND4B-206ENST00000474386 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
DENND4B-206ENST00000474386 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
DENND4B-206ENST00000474386 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
DENND4B-206ENST00000474386 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
DENND4B-206ENST00000474386 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
DENND4B-206ENST00000474386 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
DENND4B-206ENST00000474386 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
DENND4B-206ENST00000474386 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
DENND4B-206ENST00000474386 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
DENND4B-206ENST00000474386 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
DENND4B-206ENST00000474386 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
DENND4B-206ENST00000474386 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
DENND4B-206ENST00000474386 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
DENND4B-206ENST00000474386 PEG3Q9GZU2 1588 aa21.47■■□□□ 1.03
DENND4B-206ENST00000474386 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
DENND4B-206ENST00000474386 WIZO95785 1651 aa21.29■■□□□ 1
DENND4B-206ENST00000474386 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
DENND4B-206ENST00000474386 NESP48681 1621 aa21.13■□□□□ 0.97
DENND4B-206ENST00000474386 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
DENND4B-206ENST00000474386 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
DENND4B-206ENST00000474386 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
DENND4B-206ENST00000474386 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
DENND4B-206ENST00000474386 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
DENND4B-206ENST00000474386 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
DENND4B-206ENST00000474386 CFTRP13569 1480 aa20.91■□□□□ 0.94
DENND4B-206ENST00000474386 CUX2O14529 1486 aa20.87■□□□□ 0.93
DENND4B-206ENST00000474386 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
DENND4B-206ENST00000474386 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
DENND4B-206ENST00000474386 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
DENND4B-206ENST00000474386 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
DENND4B-206ENST00000474386 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
DENND4B-206ENST00000474386 WDR62O43379 1518 aa20.61■□□□□ 0.89
DENND4B-206ENST00000474386 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
DENND4B-206ENST00000474386 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
DENND4B-206ENST00000474386 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
DENND4B-206ENST00000474386 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
DENND4B-206ENST00000474386 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
DENND4B-206ENST00000474386 DNMBPQ6XZF7 1577 aa20.37■□□□□ 0.85
DENND4B-206ENST00000474386 IFT140Q96RY7 1462 aa20.37■□□□□ 0.85
DENND4B-206ENST00000474386 SOGA1O94964 1423 aa20.29■□□□□ 0.84
DENND4B-206ENST00000474386 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
DENND4B-206ENST00000474386 CUX1P39880 1505 aa20.25■□□□□ 0.83
DENND4B-206ENST00000474386 ZNF608Q9ULD9 1512 aaPredicted RBP20.24■□□□□ 0.83
DENND4B-206ENST00000474386 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
DENND4B-206ENST00000474386 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
DENND4B-206ENST00000474386 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
DENND4B-206ENST00000474386 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.829e-9■■■■■ 64
DENND4B-206ENST00000474386 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
DENND4B-206ENST00000474386 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
DENND4B-206ENST00000474386 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
DENND4B-206ENST00000474386 FBLN2P98095 1184 aa20.1■□□□□ 0.81
DENND4B-206ENST00000474386 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
DENND4B-206ENST00000474386 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
DENND4B-206ENST00000474386 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
DENND4B-206ENST00000474386 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.79
DENND4B-206ENST00000474386 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
DENND4B-206ENST00000474386 GRIN2BQ13224 1484 aa20■□□□□ 0.79
DENND4B-206ENST00000474386 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
DENND4B-206ENST00000474386 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
DENND4B-206ENST00000474386 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
DENND4B-206ENST00000474386 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
DENND4B-206ENST00000474386 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
DENND4B-206ENST00000474386 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
DENND4B-206ENST00000474386 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
DENND4B-206ENST00000474386 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
DENND4B-206ENST00000474386 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
DENND4B-206ENST00000474386 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
DENND4B-206ENST00000474386 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
DENND4B-206ENST00000474386 IGF1RP08069 1367 aa19.76■□□□□ 0.75
DENND4B-206ENST00000474386 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
DENND4B-206ENST00000474386 CHD1O14646 1710 aa19.74■□□□□ 0.75
DENND4B-206ENST00000474386 GRIN2AQ12879 1464 aa19.7■□□□□ 0.74
DENND4B-206ENST00000474386 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
DENND4B-206ENST00000474386 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
DENND4B-206ENST00000474386 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
DENND4B-206ENST00000474386 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
DENND4B-206ENST00000474386 NUP160Q12769 1436 aa19.62■□□□□ 0.73
DENND4B-206ENST00000474386 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
DENND4B-206ENST00000474386 RIMBP3CA6NJZ7 1639 aa19.6■□□□□ 0.73
DENND4B-206ENST00000474386 RIMBP3BA6NNM3 1639 aa19.6■□□□□ 0.73
DENND4B-206ENST00000474386 RIMBP3Q9UFD9 1639 aa19.6■□□□□ 0.73
DENND4B-206ENST00000474386 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
DENND4B-206ENST00000474386 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
DENND4B-206ENST00000474386 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
DENND4B-206ENST00000474386 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
DENND4B-206ENST00000474386 CUL7Q14999 1698 aa19.51■□□□□ 0.71
DENND4B-206ENST00000474386 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms