RNA–Protein interactions for RNA: ENST00000474335.1

PIP4K2A-205, Transcript of phosphatidylinositol-5-phosphate 4-kinase type 2 alpha, humanhuman

TSL 2

Gene PIP4K2A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIP4K2A-205ENST00000474335 NISCHQ9Y2I1 1504 aa38.58■■■■□ 3.77
PIP4K2A-205ENST00000474335 CCDC180Q9P1Z9 1646 aa34■■■■□ 3.03
PIP4K2A-205ENST00000474335 ABCC9O60706 1549 aa32.69■■■□□ 2.82
PIP4K2A-205ENST00000474335 ZCCHC6Q5VYS8 1495 aaKnown RBP32.25■■■□□ 2.75
PIP4K2A-205ENST00000474335 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.71
PIP4K2A-205ENST00000474335 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
PIP4K2A-205ENST00000474335 MYO15BQ96JP2 1530 aa31.86■■■□□ 2.69
PIP4K2A-205ENST00000474335 NACADO15069 1562 aa31.83■■■□□ 2.69
PIP4K2A-205ENST00000474335 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
PIP4K2A-205ENST00000474335 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
PIP4K2A-205ENST00000474335 UNC13AQ9UPW8 1703 aa31.02■■■□□ 2.56
PIP4K2A-205ENST00000474335 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
PIP4K2A-205ENST00000474335 BICRAQ9NZM4 1560 aa30.78■■■□□ 2.52
PIP4K2A-205ENST00000474335 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
PIP4K2A-205ENST00000474335 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
PIP4K2A-205ENST00000474335 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
PIP4K2A-205ENST00000474335 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
PIP4K2A-205ENST00000474335 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
PIP4K2A-205ENST00000474335 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
PIP4K2A-205ENST00000474335 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
PIP4K2A-205ENST00000474335 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
PIP4K2A-205ENST00000474335 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
PIP4K2A-205ENST00000474335 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
PIP4K2A-205ENST00000474335 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
PIP4K2A-205ENST00000474335 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
PIP4K2A-205ENST00000474335 WIZO95785 1651 aa29.44■■■□□ 2.3
PIP4K2A-205ENST00000474335 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
PIP4K2A-205ENST00000474335 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
PIP4K2A-205ENST00000474335 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
PIP4K2A-205ENST00000474335 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
PIP4K2A-205ENST00000474335 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
PIP4K2A-205ENST00000474335 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
PIP4K2A-205ENST00000474335 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
PIP4K2A-205ENST00000474335 CFTRP13569 1480 aa28.52■■■□□ 2.16
PIP4K2A-205ENST00000474335 NESP48681 1621 aa28.49■■■□□ 2.15
PIP4K2A-205ENST00000474335 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
PIP4K2A-205ENST00000474335 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
PIP4K2A-205ENST00000474335 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.12
PIP4K2A-205ENST00000474335 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
PIP4K2A-205ENST00000474335 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
PIP4K2A-205ENST00000474335 CEP164Q9UPV0 1460 aa28.09■■■□□ 2.09
PIP4K2A-205ENST00000474335 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
PIP4K2A-205ENST00000474335 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.06
PIP4K2A-205ENST00000474335 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
PIP4K2A-205ENST00000474335 THOC2Q8NI27 1593 aaKnown RBP27.91■■■□□ 2.06
PIP4K2A-205ENST00000474335 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
PIP4K2A-205ENST00000474335 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
PIP4K2A-205ENST00000474335 CUX1P39880 1505 aa27.86■■■□□ 2.05
PIP4K2A-205ENST00000474335 WDR62O43379 1518 aa27.85■■■□□ 2.05
PIP4K2A-205ENST00000474335 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
PIP4K2A-205ENST00000474335 TOPBP1Q92547 1522 aa27.84■■■□□ 2.05
PIP4K2A-205ENST00000474335 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
PIP4K2A-205ENST00000474335 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
PIP4K2A-205ENST00000474335 BIVM-ERCC5R4GMW8 1640 aa27.77■■■□□ 2.04
PIP4K2A-205ENST00000474335 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
PIP4K2A-205ENST00000474335 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
PIP4K2A-205ENST00000474335 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
PIP4K2A-205ENST00000474335 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.01
PIP4K2A-205ENST00000474335 CUX2O14529 1486 aa27.61■■■□□ 2.01
PIP4K2A-205ENST00000474335 SOGA1O94964 1423 aa27.54■■■□□ 2
PIP4K2A-205ENST00000474335 RAD54L2Q9Y4B4 1467 aa27.52■■■□□ 2
PIP4K2A-205ENST00000474335 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
PIP4K2A-205ENST00000474335 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
PIP4K2A-205ENST00000474335 ABCA10Q8WWZ4 1543 aa27.42■■□□□ 1.98
PIP4K2A-205ENST00000474335 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
PIP4K2A-205ENST00000474335 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
PIP4K2A-205ENST00000474335 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
PIP4K2A-205ENST00000474335 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.95
PIP4K2A-205ENST00000474335 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
PIP4K2A-205ENST00000474335 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
PIP4K2A-205ENST00000474335 RUSC2Q8N2Y8 1516 aa27.24■■□□□ 1.95
PIP4K2A-205ENST00000474335 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
PIP4K2A-205ENST00000474335 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
PIP4K2A-205ENST00000474335 EEA1Q15075 1411 aa27.14■■□□□ 1.93
PIP4K2A-205ENST00000474335 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
PIP4K2A-205ENST00000474335 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
PIP4K2A-205ENST00000474335 IGF1RP08069 1367 aa27.11■■□□□ 1.93
PIP4K2A-205ENST00000474335 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
PIP4K2A-205ENST00000474335 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
PIP4K2A-205ENST00000474335 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
PIP4K2A-205ENST00000474335 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
PIP4K2A-205ENST00000474335 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
PIP4K2A-205ENST00000474335 CUL7Q14999 1698 aa26.95■■□□□ 1.91
PIP4K2A-205ENST00000474335 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
PIP4K2A-205ENST00000474335 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
PIP4K2A-205ENST00000474335 FHAD1B1AJZ9 1412 aa26.93■■□□□ 1.9
PIP4K2A-205ENST00000474335 PRXQ9BXM0 1461 aa26.92■■□□□ 1.9
PIP4K2A-205ENST00000474335 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
PIP4K2A-205ENST00000474335 RAPGEF2Q9Y4G8 1499 aa26.84■■□□□ 1.89
PIP4K2A-205ENST00000474335 KIF21BO75037 1637 aa26.81■■□□□ 1.88
PIP4K2A-205ENST00000474335 CHMP7Q8WUX9 453 aaPredicted RBP26.81■■□□□ 1.88
PIP4K2A-205ENST00000474335 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
PIP4K2A-205ENST00000474335 CHD1O14646 1710 aa26.78■■□□□ 1.88
PIP4K2A-205ENST00000474335 FBLN2P98095 1184 aa26.77■■□□□ 1.88
PIP4K2A-205ENST00000474335 GOLGA3Q08378 1498 aa26.69■■□□□ 1.86
PIP4K2A-205ENST00000474335 NUP160Q12769 1436 aa26.66■■□□□ 1.86
PIP4K2A-205ENST00000474335 CEP170Q5SW79 1584 aa26.64■■□□□ 1.86
PIP4K2A-205ENST00000474335 EHMT2Q96KQ7 1210 aa26.62■■□□□ 1.85
PIP4K2A-205ENST00000474335 LOC105371045A0A1W2PR82 267 aa26.6■■□□□ 1.85
PIP4K2A-205ENST00000474335 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms