RNA–Protein interactions for RNA: ENST00000474317.1

SPATA13-210, Transcript of spermatogenesis associated 13, humanhuman

TSL 2

Gene SPATA13, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-210ENST00000474317 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
SPATA13-210ENST00000474317 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
SPATA13-210ENST00000474317 ABCC9O60706 1549 aa21.74■■□□□ 1.07
SPATA13-210ENST00000474317 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
SPATA13-210ENST00000474317 NACADO15069 1562 aa21.09■□□□□ 0.97
SPATA13-210ENST00000474317 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
SPATA13-210ENST00000474317 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
SPATA13-210ENST00000474317 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
SPATA13-210ENST00000474317 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
SPATA13-210ENST00000474317 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
SPATA13-210ENST00000474317 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
SPATA13-210ENST00000474317 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
SPATA13-210ENST00000474317 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
SPATA13-210ENST00000474317 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPATA13-210ENST00000474317 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
SPATA13-210ENST00000474317 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
SPATA13-210ENST00000474317 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
SPATA13-210ENST00000474317 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
SPATA13-210ENST00000474317 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
SPATA13-210ENST00000474317 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
SPATA13-210ENST00000474317 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
SPATA13-210ENST00000474317 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
SPATA13-210ENST00000474317 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
SPATA13-210ENST00000474317 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
SPATA13-210ENST00000474317 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
SPATA13-210ENST00000474317 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
SPATA13-210ENST00000474317 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
SPATA13-210ENST00000474317 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
SPATA13-210ENST00000474317 WIZO95785 1651 aa19.24■□□□□ 0.67
SPATA13-210ENST00000474317 TOP2AP11388 1531 aaKnown RBP19.11■□□□□ 0.65
SPATA13-210ENST00000474317 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
SPATA13-210ENST00000474317 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
SPATA13-210ENST00000474317 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
SPATA13-210ENST00000474317 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
SPATA13-210ENST00000474317 NESP48681 1621 aa18.83■□□□□ 0.61
SPATA13-210ENST00000474317 CFTRP13569 1480 aa18.79■□□□□ 0.6
SPATA13-210ENST00000474317 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
SPATA13-210ENST00000474317 ERCC6Q03468 1493 aa18.77■□□□□ 0.6
SPATA13-210ENST00000474317 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
SPATA13-210ENST00000474317 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
SPATA13-210ENST00000474317 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
SPATA13-210ENST00000474317 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
SPATA13-210ENST00000474317 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
SPATA13-210ENST00000474317 CUX2O14529 1486 aa18.57■□□□□ 0.56
SPATA13-210ENST00000474317 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
SPATA13-210ENST00000474317 WDR62O43379 1518 aa18.49■□□□□ 0.55
SPATA13-210ENST00000474317 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
SPATA13-210ENST00000474317 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
SPATA13-210ENST00000474317 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
SPATA13-210ENST00000474317 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
SPATA13-210ENST00000474317 CUX1P39880 1505 aa18.25■□□□□ 0.51
SPATA13-210ENST00000474317 IFT140Q96RY7 1462 aa18.25■□□□□ 0.51
SPATA13-210ENST00000474317 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SPATA13-210ENST00000474317 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
SPATA13-210ENST00000474317 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
SPATA13-210ENST00000474317 BIVM-ERCC5R4GMW8 1640 aa18.18■□□□□ 0.5
SPATA13-210ENST00000474317 TOP2BQ02880 1626 aa18.17■□□□□ 0.5
SPATA13-210ENST00000474317 SOGA1O94964 1423 aa18.14■□□□□ 0.49
SPATA13-210ENST00000474317 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
SPATA13-210ENST00000474317 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
SPATA13-210ENST00000474317 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
SPATA13-210ENST00000474317 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
SPATA13-210ENST00000474317 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
SPATA13-210ENST00000474317 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
SPATA13-210ENST00000474317 ABCA10Q8WWZ4 1543 aa18.04■□□□□ 0.48
SPATA13-210ENST00000474317 TDRD9Q8NDG6 1382 aaKnown RBP17.98■□□□□ 0.47
SPATA13-210ENST00000474317 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPATA13-210ENST00000474317 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
SPATA13-210ENST00000474317 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
SPATA13-210ENST00000474317 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
SPATA13-210ENST00000474317 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
SPATA13-210ENST00000474317 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
SPATA13-210ENST00000474317 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
SPATA13-210ENST00000474317 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
SPATA13-210ENST00000474317 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
SPATA13-210ENST00000474317 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
SPATA13-210ENST00000474317 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
SPATA13-210ENST00000474317 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
SPATA13-210ENST00000474317 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
SPATA13-210ENST00000474317 ADAMTS12P58397 1594 aa17.77■□□□□ 0.44
SPATA13-210ENST00000474317 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
SPATA13-210ENST00000474317 CHD1O14646 1710 aa17.75■□□□□ 0.43
SPATA13-210ENST00000474317 FBLN2P98095 1184 aa17.74■□□□□ 0.43
SPATA13-210ENST00000474317 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
SPATA13-210ENST00000474317 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
SPATA13-210ENST00000474317 CUL7Q14999 1698 aa17.72■□□□□ 0.43
SPATA13-210ENST00000474317 IGF1RP08069 1367 aa17.71■□□□□ 0.43
SPATA13-210ENST00000474317 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
SPATA13-210ENST00000474317 EEA1Q15075 1411 aa17.67■□□□□ 0.42
SPATA13-210ENST00000474317 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.41
SPATA13-210ENST00000474317 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
SPATA13-210ENST00000474317 NUP160Q12769 1436 aa17.62■□□□□ 0.41
SPATA13-210ENST00000474317 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
SPATA13-210ENST00000474317 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
SPATA13-210ENST00000474317 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
SPATA13-210ENST00000474317 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
SPATA13-210ENST00000474317 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
SPATA13-210ENST00000474317 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
SPATA13-210ENST00000474317 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
SPATA13-210ENST00000474317 SHROOM2Q13796 1616 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms