RNA–Protein interactions for RNA: ENST00000474235.1

APOBEC3H-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3H, humanhuman

TSL 2

Gene APOBEC3H, Length 338 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3H-205ENST00000474235 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
APOBEC3H-205ENST00000474235 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
APOBEC3H-205ENST00000474235 ABCC9O60706 1549 aa33.39■■■□□ 2.94
APOBEC3H-205ENST00000474235 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
APOBEC3H-205ENST00000474235 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
APOBEC3H-205ENST00000474235 NACADO15069 1562 aa32.02■■■□□ 2.72
APOBEC3H-205ENST00000474235 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
APOBEC3H-205ENST00000474235 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
APOBEC3H-205ENST00000474235 DCAF1Q9Y4B6 1507 aa31.57■■■□□ 2.64
APOBEC3H-205ENST00000474235 PABPN1Q86U42 306 aaKnown RBP eCLIP31.26■■■□□ 2.59
APOBEC3H-205ENST00000474235 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
APOBEC3H-205ENST00000474235 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
APOBEC3H-205ENST00000474235 SCRIBQ14160 1630 aa30.88■■■□□ 2.53
APOBEC3H-205ENST00000474235 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
APOBEC3H-205ENST00000474235 DNAJC5BQ9UF47 199 aa30.77■■■□□ 2.52
APOBEC3H-205ENST00000474235 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
APOBEC3H-205ENST00000474235 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
APOBEC3H-205ENST00000474235 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
APOBEC3H-205ENST00000474235 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
APOBEC3H-205ENST00000474235 NCAPD3P42695 1498 aa29.58■■■□□ 2.33
APOBEC3H-205ENST00000474235 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
APOBEC3H-205ENST00000474235 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
APOBEC3H-205ENST00000474235 SMARCA2P51531 1590 aa29.51■■■□□ 2.31
APOBEC3H-205ENST00000474235 HMGXB3Q12766 1538 aa29.34■■■□□ 2.29
APOBEC3H-205ENST00000474235 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
APOBEC3H-205ENST00000474235 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
APOBEC3H-205ENST00000474235 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
APOBEC3H-205ENST00000474235 RSF1Q96T23 1441 aaPredicted RBP29.02■■■□□ 2.24
APOBEC3H-205ENST00000474235 WIZO95785 1651 aa28.91■■■□□ 2.22
APOBEC3H-205ENST00000474235 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
APOBEC3H-205ENST00000474235 NESP48681 1621 aa28.77■■■□□ 2.2
APOBEC3H-205ENST00000474235 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
APOBEC3H-205ENST00000474235 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
APOBEC3H-205ENST00000474235 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
APOBEC3H-205ENST00000474235 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
APOBEC3H-205ENST00000474235 CUX2O14529 1486 aa28.63■■■□□ 2.17
APOBEC3H-205ENST00000474235 CFTRP13569 1480 aa28.48■■■□□ 2.15
APOBEC3H-205ENST00000474235 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
APOBEC3H-205ENST00000474235 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
APOBEC3H-205ENST00000474235 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
APOBEC3H-205ENST00000474235 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
APOBEC3H-205ENST00000474235 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
APOBEC3H-205ENST00000474235 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
APOBEC3H-205ENST00000474235 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
APOBEC3H-205ENST00000474235 WDR62O43379 1518 aa28.16■■■□□ 2.1
APOBEC3H-205ENST00000474235 DNAJC5Q9H3Z4 198 aa28.01■■■□□ 2.07
APOBEC3H-205ENST00000474235 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
APOBEC3H-205ENST00000474235 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
APOBEC3H-205ENST00000474235 PRDM2Q13029 1718 aa27.95■■■□□ 2.07
APOBEC3H-205ENST00000474235 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
APOBEC3H-205ENST00000474235 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
APOBEC3H-205ENST00000474235 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
APOBEC3H-205ENST00000474235 SOGA1O94964 1423 aa27.6■■■□□ 2.01
APOBEC3H-205ENST00000474235 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
APOBEC3H-205ENST00000474235 OSCARQ8IYS5 282 aa27.57■■■□□ 2
APOBEC3H-205ENST00000474235 ZNF608Q9ULD9 1512 aaPredicted RBP27.55■■■□□ 2
APOBEC3H-205ENST00000474235 CUX1P39880 1505 aa27.51■■■□□ 2
APOBEC3H-205ENST00000474235 FGD5Q6ZNL6 1462 aa27.51■■□□□ 1.99
APOBEC3H-205ENST00000474235 RAD54L2Q9Y4B4 1467 aa27.46■■□□□ 1.99
APOBEC3H-205ENST00000474235 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.99
APOBEC3H-205ENST00000474235 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
APOBEC3H-205ENST00000474235 TDRD9Q8NDG6 1382 aaKnown RBP27.43■■□□□ 1.98
APOBEC3H-205ENST00000474235 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
APOBEC3H-205ENST00000474235 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
APOBEC3H-205ENST00000474235 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
APOBEC3H-205ENST00000474235 FBLN2P98095 1184 aa27.33■■□□□ 1.97
APOBEC3H-205ENST00000474235 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
APOBEC3H-205ENST00000474235 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.95
APOBEC3H-205ENST00000474235 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
APOBEC3H-205ENST00000474235 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
APOBEC3H-205ENST00000474235 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
APOBEC3H-205ENST00000474235 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
APOBEC3H-205ENST00000474235 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
APOBEC3H-205ENST00000474235 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
APOBEC3H-205ENST00000474235 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
APOBEC3H-205ENST00000474235 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
APOBEC3H-205ENST00000474235 TRIM41Q8WV44 630 aa27.03■■□□□ 1.92
APOBEC3H-205ENST00000474235 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
APOBEC3H-205ENST00000474235 CHD1O14646 1710 aa26.96■■□□□ 1.91
APOBEC3H-205ENST00000474235 FHAD1B1AJZ9 1412 aa26.95■■□□□ 1.9
APOBEC3H-205ENST00000474235 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
APOBEC3H-205ENST00000474235 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
APOBEC3H-205ENST00000474235 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
APOBEC3H-205ENST00000474235 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
APOBEC3H-205ENST00000474235 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
APOBEC3H-205ENST00000474235 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
APOBEC3H-205ENST00000474235 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
APOBEC3H-205ENST00000474235 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
APOBEC3H-205ENST00000474235 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
APOBEC3H-205ENST00000474235 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
APOBEC3H-205ENST00000474235 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
APOBEC3H-205ENST00000474235 IGF1RP08069 1367 aa26.79■■□□□ 1.88
APOBEC3H-205ENST00000474235 NUP160Q12769 1436 aa26.74■■□□□ 1.87
APOBEC3H-205ENST00000474235 CARMIL1Q5VZK9 1371 aa26.67■■□□□ 1.86
APOBEC3H-205ENST00000474235 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
APOBEC3H-205ENST00000474235 JPH4Q96JJ6 628 aa26.62■■□□□ 1.85
APOBEC3H-205ENST00000474235 CEP170Q5SW79 1584 aa26.61■■□□□ 1.85
APOBEC3H-205ENST00000474235 CUL7Q14999 1698 aa26.6■■□□□ 1.85
APOBEC3H-205ENST00000474235 KIAA0586Q9BVV6 1533 aa26.52■■□□□ 1.84
APOBEC3H-205ENST00000474235 PRG4Q92954 1404 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms