RNA–Protein interactions for RNA: ENST00000473733.5

STK40-207, Transcript of serine/threonine kinase 40, humanhuman

TSL 3

Gene STK40, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-207ENST00000473733 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
STK40-207ENST00000473733 ABCC9O60706 1549 aa24.56■■□□□ 1.52
STK40-207ENST00000473733 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
STK40-207ENST00000473733 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
STK40-207ENST00000473733 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
STK40-207ENST00000473733 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
STK40-207ENST00000473733 NACADO15069 1562 aa22.72■■□□□ 1.23
STK40-207ENST00000473733 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
STK40-207ENST00000473733 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
STK40-207ENST00000473733 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
STK40-207ENST00000473733 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
STK40-207ENST00000473733 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
STK40-207ENST00000473733 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
STK40-207ENST00000473733 DNAJC5Q9H3Z4 198 aa21.92■■□□□ 1.1
STK40-207ENST00000473733 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
STK40-207ENST00000473733 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
STK40-207ENST00000473733 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
STK40-207ENST00000473733 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
STK40-207ENST00000473733 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.07
STK40-207ENST00000473733 CUX2O14529 1486 aa21.26■□□□□ 0.99
STK40-207ENST00000473733 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
STK40-207ENST00000473733 NCAPD3P42695 1498 aa21■□□□□ 0.95
STK40-207ENST00000473733 NESP48681 1621 aa20.97■□□□□ 0.95
STK40-207ENST00000473733 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
STK40-207ENST00000473733 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
STK40-207ENST00000473733 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
STK40-207ENST00000473733 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
STK40-207ENST00000473733 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
STK40-207ENST00000473733 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
STK40-207ENST00000473733 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
STK40-207ENST00000473733 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
STK40-207ENST00000473733 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
STK40-207ENST00000473733 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
STK40-207ENST00000473733 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
STK40-207ENST00000473733 PEG3Q9GZU2 1588 aa20.48■□□□□ 0.87
STK40-207ENST00000473733 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
STK40-207ENST00000473733 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
STK40-207ENST00000473733 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
STK40-207ENST00000473733 WDR62O43379 1518 aa20.34■□□□□ 0.85
STK40-207ENST00000473733 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
STK40-207ENST00000473733 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
STK40-207ENST00000473733 WIZO95785 1651 aa20.19■□□□□ 0.82
STK40-207ENST00000473733 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
STK40-207ENST00000473733 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
STK40-207ENST00000473733 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
STK40-207ENST00000473733 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
STK40-207ENST00000473733 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
STK40-207ENST00000473733 CFTRP13569 1480 aa20■□□□□ 0.79
STK40-207ENST00000473733 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
STK40-207ENST00000473733 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
STK40-207ENST00000473733 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
STK40-207ENST00000473733 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
STK40-207ENST00000473733 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
STK40-207ENST00000473733 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
STK40-207ENST00000473733 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
STK40-207ENST00000473733 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
STK40-207ENST00000473733 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
STK40-207ENST00000473733 CHD1O14646 1710 aa19.73■□□□□ 0.75
STK40-207ENST00000473733 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
STK40-207ENST00000473733 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
STK40-207ENST00000473733 FBLN2P98095 1184 aa19.69■□□□□ 0.74
STK40-207ENST00000473733 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.743e-7■■■□□ 17
STK40-207ENST00000473733 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
STK40-207ENST00000473733 CCDC88BA6NC98 1476 aa19.64■□□□□ 0.73
STK40-207ENST00000473733 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.73
STK40-207ENST00000473733 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
STK40-207ENST00000473733 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
STK40-207ENST00000473733 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
STK40-207ENST00000473733 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
STK40-207ENST00000473733 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
STK40-207ENST00000473733 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
STK40-207ENST00000473733 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
STK40-207ENST00000473733 SOGA1O94964 1423 aa19.4■□□□□ 0.7
STK40-207ENST00000473733 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
STK40-207ENST00000473733 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
STK40-207ENST00000473733 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
STK40-207ENST00000473733 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
STK40-207ENST00000473733 MAGI1Q96QZ7 1491 aaPredicted RBP19.27■□□□□ 0.67
STK40-207ENST00000473733 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
STK40-207ENST00000473733 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
STK40-207ENST00000473733 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
STK40-207ENST00000473733 CUX1P39880 1505 aa19.21■□□□□ 0.67
STK40-207ENST00000473733 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
STK40-207ENST00000473733 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
STK40-207ENST00000473733 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
STK40-207ENST00000473733 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
STK40-207ENST00000473733 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
STK40-207ENST00000473733 GRIN2AQ12879 1464 aa19.02■□□□□ 0.63
STK40-207ENST00000473733 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
STK40-207ENST00000473733 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
STK40-207ENST00000473733 NUP160Q12769 1436 aa18.94■□□□□ 0.62
STK40-207ENST00000473733 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
STK40-207ENST00000473733 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
STK40-207ENST00000473733 FAM69CQ0P6D2 419 aa18.89■□□□□ 0.61
STK40-207ENST00000473733 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
STK40-207ENST00000473733 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
STK40-207ENST00000473733 ILDR1Q86SU0 546 aaPredicted RBP18.86■□□□□ 0.61
STK40-207ENST00000473733 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
STK40-207ENST00000473733 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
STK40-207ENST00000473733 ABCC10Q5T3U5 1492 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms